RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 PCSK6P29122 969 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 HNF4AP41235 474 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 RGS1Q08116 209 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 SNX1Q13596 522 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 NDUFAF5Q5TEU4 345 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 HECTD2Q5U5R9 776 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 C16orf47Q6ZP98 133 aaPredicted RBP17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 GK5Q6ZS86 529 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 TRILQ7L0X0 811 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 ABHD13Q7L211 337 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 AFAP1L2Q8N4X5 818 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 APCDD1LQ8NCL9 501 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 SREK1Q8WXA9 508 aaKnown RBP17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 VMP1Q96GC9 406 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 LIN28AQ9H9Z2 209 aaKnown RBP17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 PAK5Q9P286 719 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 VPS9D1Q9Y2B5 631 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 A0A0G2JMM0 328 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 A0A1W2PPB8 328 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 A0A1W2PRS3 328 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 KIR3DP1A8MWS1 328 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 SYT5O00445 386 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 LIASO43766 372 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 OR2J2O76002 312 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 ZFAND5O76080 213 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 IPO7O95373 1038 aaKnown RBP17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 RNH1P13489 461 aaKnown RBP17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 ENO3P13929 434 aaPredicted RBP17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 MAGEA5P43359 124 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 NAE1Q13564 534 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 KIAA0408Q6ZU52 694 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 PIWIL4Q7Z3Z4 852 aaKnown RBP17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 TBC1D19Q8N5T2 526 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 NANOS1Q8WY41 292 aaKnown RBP17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 NCLNQ969V3 563 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 SARAFQ96BY9 339 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 ARSGQ96EG1 525 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 CNPPD1Q9BV87 410 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 SYBUQ9NX95 663 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 ZFATQ9P243 1243 aa17.62■□□□□ 0.41
NCKIPSD-209ENST00000470006 ARHGAP21Q5T5U3 1957 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 GRID2IPA4D2P6 1211 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 AP3B1O00203 1094 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 AVILO75366 819 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 F7P08709 466 aaPredicted RBP17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 ZSCAN5DPP0CG00 497 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 OGNP20774 298 aaKnown RBP17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 BMP5P22003 454 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 TACR1P25103 407 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 HOXC12P31275 282 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 CCR8P51685 355 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 BASP1P80723 227 aaKnown RBP17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 PWP1Q13610 501 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 SLC10A1Q14973 349 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 OASLQ15646 514 aaKnown RBP17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 ZNF750Q32MQ0 723 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 AGTRAPQ6RW13 159 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 GPALPP1Q8IXQ4 340 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 FAM109AQ8N4B1 249 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 TMEM251Q8N6I4 163 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 LRRC57Q8N9N7 239 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 GIMAP7Q8NHV1 300 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 C1orf54Q8WWF1 131 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 PDLIM2Q96JY6 352 aa17.61■□□□□ 0.41
NCKIPSD-209ENST00000470006 HSPB2A8KAH6 182 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 MIF4GDA9UHW6 222 aaKnown RBP17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 AQP7O14520 342 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 OR6B1O95007 311 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 LY6G6DO95868 133 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 IGHG3P01860 377 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 PAMP19021 973 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 RAB8AP61006 207 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 NKX6-1P78426 367 aaPredicted RBP17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 PCBP2Q15366 365 aaKnown RBP eCLIP17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 HSPB2Q16082 182 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 RIPPLY2Q5TAB7 128 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 NEPROQ6NW34 567 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 CYHR1Q6ZMK1 362 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 MBOAT1Q6ZNC8 495 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 FAM47EQ6ZV65 393 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 CENPUQ71F23 418 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 CILP2Q8IUL8 1156 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 PALM2Q8IXS6 379 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 CPNE9Q8IYJ1 553 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 FAM173AQ9BQD7 235 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 KIFC1Q9BW19 673 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 IL1RL2Q9HB29 575 aa17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 INTS10Q9NVR2 710 aaKnown RBP17.6■□□□□ 0.41
NCKIPSD-209ENST00000470006 IGKV3D-11A0A0A0MRZ8 115 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 A0A1B0GVC2 190 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 TUBAL3A6NHL2 446 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 WWP2O00308 870 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 DVL2O14641 736 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 GLSO94925 669 aaPredicted RBP17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 FTCDO95954 541 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 CELA3AP09093 270 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 GABRA1P14867 456 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 CNR1P21554 472 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 CCND1P24385 295 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 SOX3P41225 446 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms