RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 PDE10AQ9Y233 779 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 FIS1Q9Y3D6 152 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 TSC22D4Q9Y3Q8 395 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 TESMINQ9Y4I5 508 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 OARD1Q9Y530 152 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 SCN8AQ9UQD0 1980 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 PLXNA2O75051 1894 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 UNC80Q8N2C7 3258 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 PRUNE2Q8WUY3 3088 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 THADAQ6YHU6 1953 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 CACNA1IQ9P0X4 2223 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 GMNCA6NCL1 334 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 A8MT66 165 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 ARHGEF33A8MVX0 844 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 TARM1B6A8C7 271 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 C10orf142B7Z368 130 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 GFYI3L273 518 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 CLGNO14967 610 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 YY2O15391 372 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 BIRC5O15392 142 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 TAPBPO15533 448 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 AQP9O43315 295 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 ITM2AO43736 263 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 PSIP1O75475 530 aaKnown RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 CRCPO75575 148 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 PIAS2O75928 621 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 WDR47O94967 919 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 MATN4O95460 622 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 HSPA4LO95757 839 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 CD1AP06126 327 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 FTH1P19P0C7X4 201 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 DHRS4L1P0CG22 281 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 FGF3P11487 239 aaPredicted RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 TYRP1P17643 537 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 IMPDH1P20839 514 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 MALP21145 153 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 ACADLP28330 430 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 MAPK9P45984 424 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 SLC1A6P48664 564 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 MAP2K6P52564 334 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 SEC24CP53992 1094 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 SLC18A1P54219 525 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 ATXN3P54252 364 aaPredicted RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 PRKAA2P54646 552 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 MAZP56270 477 aaKnown RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 ABCE1P61221 599 aaKnown RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 HNRNPKP61978 463 aaKnown RBP eCLIP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 BNC1Q01954 994 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 BST1Q10588 318 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 ASPHQ12797 758 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 OVGP1Q12889 678 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 RPA4Q13156 261 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 NAE1Q13564 534 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 FASTKQ14296 549 aaKnown RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 GBX1Q14549 363 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 ELOCQ15369 112 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 TGFBIQ15582 683 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 CSRP2Q16527 193 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 HLA-BQ31612 363 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 GFOD2Q3B7J2 385 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 ZNF658BQ4V348 819 aaPredicted RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 UNC50Q53HI1 259 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 ZNF678Q5SXM1 525 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 LIPMQ5VYY2 423 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 FAM219BQ5XKK7 198 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 SULT1C3Q6IMI6 304 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 CAPRIN2Q6IMN6 1127 aaKnown RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 TCEAL6Q6IPX3 200 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 ZNF529Q6P280 563 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 AGTRAPQ6RW13 159 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 SUSD1Q6UWL2 747 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 SBSNQ6UWP8 590 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 NEK10Q6ZWH5 1172 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 CPLX4Q7Z7G2 160 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 ADAMTSL2Q86TH1 951 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 LCA5Q86VQ0 697 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 MYLK4Q86YV6 388 aaPredicted RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 SLC22A9Q8IVM8 553 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 WDR75Q8IWA0 830 aaKnown RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 SYTL1Q8IYJ3 562 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 RAB42Q8N4Z0 105 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 ZBTB44Q8NCP5 570 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 OR10H5Q8NGA6 315 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 OR4E2Q8NGC2 313 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 OR9A1PQ8NGU1 263 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 RHEBL1Q8TAI7 183 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 CEP76Q8TAP6 659 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 RDH11Q8TC12 318 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 MAGEC3Q8TD91 643 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 TCEAL3Q969E4 200 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 RAD51AP1Q96B01 352 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 PYCR2Q96C36 320 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 RHBDF1Q96CC6 855 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 MTFMTQ96DP5 389 aaKnown RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 CCDC126Q96EE4 140 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 ZC3H10Q96K80 434 aaKnown RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 PPP1R36Q96LQ0 422 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 CCDC138Q96M89 665 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 CAMK1GQ96NX5 476 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms