RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 TYMPP19971 482 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 STIP1P31948 543 aaKnown RBP3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 SMSP52788 366 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 HUNKP57058 714 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 STARD6P59095 220 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 CYCSP99999 105 aaKnown RBP3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 CNTN1Q12860 1018 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 STX1AQ16623 288 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 MTHFSDQ2M296 383 aaKnown RBP3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 ADAMTSL4-AS1Q5T5F5 129 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 SNRNP48Q6IEG0 339 aaKnown RBP3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 USP43Q70EL4 1123 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 SERPINA12Q8IW75 414 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 OR13C5Q8NGS8 318 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 SPATA18Q8TC71 538 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 HCAR2Q8TDS4 363 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 FAM46BQ96A09 425 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 SLC35C1Q96A29 364 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 SLCO4A1Q96BD0 722 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 BPIFA2Q96DR5 249 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 LITAFQ99732 161 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 ASCL2Q99929 193 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 UBAC1Q9BSL1 405 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 PAPOLGQ9BWT3 736 aaKnown RBP3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 BARHL1Q9BZE3 327 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 MTIF3Q9H2K0 278 aaKnown RBP3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 FGF22Q9HCT0 170 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 UBQLN2Q9UHD9 624 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 TRMT6Q9UJA5 497 aaKnown RBP3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 PPP1R3CQ9UQK1 317 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 NEDD4P46934 1319 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 A0A0U1RQG5 324 aaPredicted RBP3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 ATP6AP2A0A1C7CYW4 349 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 A0A1W2PR80 420 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 PRR23AA6NEV1 266 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 SLC15A5A6NIM6 579 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 PRR23D1E9PI22 279 aaPredicted RBP3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 NR5A2O00482 541 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 P2RX6O15547 441 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 PSMD3O43242 534 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 BCAS2O75934 225 aaPredicted RBP3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 NXPH2O95156 264 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 FGF19O95750 216 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 IGHEP01854 428 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 PRR23D2P0DMB1 279 aaPredicted RBP3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 ODC1P11926 461 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 SKILP12757 684 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 ZNF18P17022 549 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 EDNRAP25101 427 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 ACKR3P25106 362 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 GIFP27352 417 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 IRX4P78413 519 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 GIT2Q14161 759 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 SPHARQ15513 63 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 KRTAP24-1Q3LI83 254 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 PWWP2BQ6NUJ5 590 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 C17orf107Q6ZR85 190 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 Q6ZSR9 355 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 MIER3Q7Z3K6 550 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 NOTCH2NLQ7Z3S9 236 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 WBP2Q969T9 261 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 ZNF560Q96MR9 790 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 RUFY1Q96T51 708 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 SYT15Q9BQS2 421 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 TEX13AQ9BXU3 409 aaPredicted RBP3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 TNMDQ9H2S6 317 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 ZNF696Q9H7X3 374 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 MED20Q9H944 212 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 ZCCHC3Q9NUD5 404 aaKnown RBP3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 LNPEPQ9UIQ6 1025 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 PILRAQ9UKJ1 303 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 PYGO1Q9Y3Y4 419 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 ETV7Q9Y603 341 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 TEX264Q9Y6I9 313 aa3.77□□□□□ -1.81
CDC42BPA-211ENST00000466538 FGD5Q6ZNL6 1462 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 ZNF195O14628 629 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 CHUKO15111 745 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 MAGEB2O15479 319 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 MAGEC1O60732 1142 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 SEC22BO75396 215 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 MTRF1O75570 445 aaKnown RBP3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 CPNE6O95741 557 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 SFTPBP07988 381 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 ABHD2P08910 425 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 CFC1BP0CG36 223 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 CFC1P0CG37 223 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 C4BPBP20851 252 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 IL10P22301 178 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 SLC12A3P55017 1021 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 ERVK-16P61578 105 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 GFPT1Q06210 699 aaPredicted RBP3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 CCDC92Q53HC0 331 aaPredicted RBP3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 SPANXN4Q5MJ08 99 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 RAB12Q6IQ22 244 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 ARHGAP11AQ6P4F7 1023 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 BHLHB9Q6PI77 547 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 CNSTQ6PJW8 725 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 Q6ZVQ6 151 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 ZER1Q7Z7L7 766 aa3.76□□□□□ -1.81
CDC42BPA-211ENST00000466538 ZSCAN30Q86W11 494 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms