RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 KIRREL2Q6UWL6 708 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 ZNF793Q6ZN11 406 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 LANCL3Q6ZV70 420 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 EXOC3L1Q86VI1 746 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 SLC22A9Q8IVM8 553 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 C10orf107Q8IVU9 208 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 OR2L5Q8NG80 312 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 WDR20Q8TBZ3 569 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 UBE2E3Q969T4 207 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 L3HYPDHQ96EM0 354 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 QRFPRQ96P65 431 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 UBL7Q96S82 380 aaPredicted RBP11.01□□□□□ -0.65
CUX1-207ENST00000465461 SMC6Q96SB8 1091 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 HBEGFQ99075 208 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 MECRQ9BV79 373 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 TGIF2Q9GZN2 237 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 VN1R1Q9GZP7 353 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 ING2Q9H160 280 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 GSTO2Q9H4Y5 243 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 DMRT3Q9NQL9 472 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 PRDM7Q9NQW5 492 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 FBXL4Q9UKA2 621 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 NXT1Q9UKK6 140 aaKnown RBP11.01□□□□□ -0.65
CUX1-207ENST00000465461 PCDHGA11Q9Y5H2 935 aa11.01□□□□□ -0.65
CUX1-207ENST00000465461 MYOCOSA0A1B0GUC4 107 aa11□□□□□ -0.65
CUX1-207ENST00000465461 PEX12O00623 359 aa11□□□□□ -0.65
CUX1-207ENST00000465461 ATXN7O15265 892 aaPredicted RBP11□□□□□ -0.65
CUX1-207ENST00000465461 OTCP00480 354 aa11□□□□□ -0.65
CUX1-207ENST00000465461 GSTM2P28161 218 aa11□□□□□ -0.65
CUX1-207ENST00000465461 ALDH3A1P30838 453 aa11□□□□□ -0.65
CUX1-207ENST00000465461 FOXA1P55317 472 aa11□□□□□ -0.65
CUX1-207ENST00000465461 BTG2P78543 158 aa11□□□□□ -0.65
CUX1-207ENST00000465461 DEPDC1Q5TB30 811 aa11□□□□□ -0.65
CUX1-207ENST00000465461 KHDRBS2Q5VWX1 349 aaKnown RBP11□□□□□ -0.65
CUX1-207ENST00000465461 TRIM40Q6P9F5 258 aa11□□□□□ -0.65
CUX1-207ENST00000465461 SCIMPQ6UWF3 145 aa11□□□□□ -0.65
CUX1-207ENST00000465461 CDYL2Q8N8U2 506 aa11□□□□□ -0.65
CUX1-207ENST00000465461 TMEM52Q8NDY8 209 aa11□□□□□ -0.65
CUX1-207ENST00000465461 TSLPQ969D9 159 aa11□□□□□ -0.65
CUX1-207ENST00000465461 CMTM7Q96FZ5 175 aa11□□□□□ -0.65
CUX1-207ENST00000465461 SEC16BQ96JE7 1060 aa11□□□□□ -0.65
CUX1-207ENST00000465461 KCNA7Q96RP8 456 aa11□□□□□ -0.65
CUX1-207ENST00000465461 FAM117AQ9C073 453 aa11□□□□□ -0.65
CUX1-207ENST00000465461 IQCGQ9H095 443 aaKnown RBP11□□□□□ -0.65
CUX1-207ENST00000465461 TNFRSF12AQ9NP84 129 aa11□□□□□ -0.65
CUX1-207ENST00000465461 ZNF71Q9NQZ8 489 aaPredicted RBP11□□□□□ -0.65
CUX1-207ENST00000465461 LANCL2Q9NS86 450 aa11□□□□□ -0.65
CUX1-207ENST00000465461 SEMA3GQ9NS98 782 aa11□□□□□ -0.65
CUX1-207ENST00000465461 C14orf105Q9NVL8 296 aa11□□□□□ -0.65
CUX1-207ENST00000465461 OXSMQ9NWU1 459 aa11□□□□□ -0.65
CUX1-207ENST00000465461 MKS1Q9NXB0 559 aa11□□□□□ -0.65
CUX1-207ENST00000465461 TIMM22Q9Y584 194 aa11□□□□□ -0.65
CUX1-207ENST00000465461 LOC400499M0QZD8 3231 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 MGAQ8IWI9 3026 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 MED13Q9UHV7 2174 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 AGPSO00116 658 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 PLPP1O14494 284 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 CTIFO43310 598 aaKnown RBP10.99□□□□□ -0.65
CUX1-207ENST00000465461 B3GALT2O43825 422 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 TYROBPO43914 113 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 PDYNP01213 254 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 GBAP04062 536 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 PDGFAP04085 211 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 FHP07954 510 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 CHN1P15882 459 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 MAOAP21397 527 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 PIK3CBP42338 1070 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 HTR6P50406 440 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 RAP1GDS1P52306 607 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 HNRNPFP52597 415 aaKnown RBP10.99□□□□□ -0.65
CUX1-207ENST00000465461 MTTPP55157 894 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 LIM2P55344 173 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 RHAGQ02094 409 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 Q0VFX4 171 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 KCNAB2Q13303 367 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 CASP8Q14790 479 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 COLEC12Q5KU26 742 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 DCAF10Q5QP82 559 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 FRG2Q64ET8 278 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 OR4C11Q6IEV9 310 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 LRIG3Q6UXM1 1119 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 GPRIN3Q6ZVF9 776 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 CHSY3Q70JA7 882 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 PARP9Q8IXQ6 854 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 CNPY4Q8N129 248 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 FAM47BQ8NA70 645 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 OR11G2Q8NGC1 345 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 RDH11Q8TC12 318 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 SELENOMQ8WWX9 145 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 SLC39A7Q92504 469 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 TBC1D20Q96BZ9 403 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 REPS1Q96D71 796 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 CCDC126Q96EE4 140 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 ABHD17AQ96GS6 310 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 FRG2BQ96QU4 278 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 SERINC2Q96SA4 455 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 CSF3RQ99062 836 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 MAPKAP1Q9BPZ7 522 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 ELOVL6Q9H5J4 265 aa10.99□□□□□ -0.65
CUX1-207ENST00000465461 COPS7BQ9H9Q2 264 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms