RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 DYTNA2CJ06 578 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 BLACEA4D250 179 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 ZNF860A6NHJ4 632 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 POC1B-GALNT4F8VUJ3 575 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 ERI3O43414 337 aaKnown RBP15.31■□□□□ 0.04
SSNA1-204ENST00000464553 B3GALT2O43825 422 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 HNRNPH1P31943 449 aaKnown RBP15.31■□□□□ 0.04
SSNA1-204ENST00000464553 PIK3CBP42338 1070 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 TSFMP43897 325 aaKnown RBP15.31■□□□□ 0.04
SSNA1-204ENST00000464553 EFNA3P52797 238 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 HSD17B7P56937 341 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 IRF9Q00978 393 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 PFKFB4Q16877 469 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 C10orf62Q5T681 223 aaPredicted RBP15.31■□□□□ 0.04
SSNA1-204ENST00000464553 ABHD17CQ6PCB6 329 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 ADGRD1Q6QNK2 874 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 CCT6BQ92526 530 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 EXT2Q93063 718 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 ZNF354BQ96LW1 612 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 PTCHD1Q96NR3 888 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 QRFPRQ96P65 431 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 MRPL57Q9BQC6 102 aaKnown RBP15.31■□□□□ 0.04
SSNA1-204ENST00000464553 MESP1Q9BRJ9 268 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 ZBTB20Q9HC78 741 aaPredicted RBP15.31■□□□□ 0.04
SSNA1-204ENST00000464553 MMP25Q9NPA2 562 aa15.31■□□□□ 0.04
SSNA1-204ENST00000464553 MRPS33Q9Y291 106 aaKnown RBP15.31■□□□□ 0.04
SSNA1-204ENST00000464553 STX16-NPEPL1H3BU86 382 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 STX16O14662 325 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 RIPK2O43353 540 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 TBX6O95947 436 aaPredicted RBP15.3■□□□□ 0.04
SSNA1-204ENST00000464553 CD22P20273 847 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 GMPRP36959 345 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 GLRBP48167 497 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 MTTPP55157 894 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 OR4D2P58180 307 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 ZNF169Q14929 603 aaPredicted RBP15.3■□□□□ 0.04
SSNA1-204ENST00000464553 TERF2Q15554 542 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 BTBD16Q32M84 506 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 SFT2D3Q587I9 215 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 FBXO48Q5FWF7 155 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 TECRLQ5HYJ1 363 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 ABHD17BQ5VST6 288 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 GRHL2Q6ISB3 625 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 VN1R5Q7Z5H4 357 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 ZNF595Q8IYB9 648 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 LGI4Q8N135 537 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 CA13Q8N1Q1 262 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 TEX9Q8N6V9 391 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 OR7G3Q8NG95 312 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 BRIX1Q8TDN6 353 aaKnown RBP15.3■□□□□ 0.04
SSNA1-204ENST00000464553 ZNF473Q8WTR7 871 aaKnown RBP15.3■□□□□ 0.04
SSNA1-204ENST00000464553 REPS1Q96D71 796 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 CMTM7Q96FZ5 175 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 MAGEB10Q96LZ2 347 aaPredicted RBP15.3■□□□□ 0.04
SSNA1-204ENST00000464553 TXLNGYQ9BZA5 131 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 AICDAQ9GZX7 198 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 PPCSQ9HAB8 311 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 LYRM4Q9HD34 91 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 PRDM7Q9NQW5 492 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 STMN3Q9NZ72 180 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 PTGFRNQ9P2B2 879 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 PLAAQ9Y263 795 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 PCDHGA10Q9Y5H3 936 aa15.3■□□□□ 0.04
SSNA1-204ENST00000464553 COPG1Q9Y678 874 aaKnown RBP15.3■□□□□ 0.04
SSNA1-204ENST00000464553 IGKV3D-11A0A0A0MRZ8 115 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 TRAV17A0A0B4J275 112 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 TCRBV16S1A1N1A0A5B0 115 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 TRIM49D1C9J1S8 452 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 H0YIV9 168 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 B4GALT2O60909 372 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 DNAJB6O75190 326 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 SMIM24O75264 130 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 RHOXF2BP0C7M4 288 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 ITGAMP11215 1152 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 PTX3P26022 381 aaPredicted RBP15.29■□□□□ 0.04
SSNA1-204ENST00000464553 RAB38P57729 211 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 BIKQ13323 160 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 UBAP2Q5T6F2 1119 aaKnown RBP15.29■□□□□ 0.04
SSNA1-204ENST00000464553 DEPDC1Q5TB30 811 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 PAPD4Q6PIY7 484 aaKnown RBP15.29■□□□□ 0.04
SSNA1-204ENST00000464553 LANCL3Q6ZV70 420 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 CUZD1Q86UP6 607 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 L3MBTL4Q8NA19 623 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 ACMSDQ8TDX5 336 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 SNRNP40Q96DI7 357 aaKnown RBP15.29■□□□□ 0.04
SSNA1-204ENST00000464553 RHOXF2Q9BQY4 288 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 CENPKQ9BS16 269 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 MS4A8Q9BY19 250 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 MRPL46Q9H2W6 279 aaKnown RBP15.29■□□□□ 0.04
SSNA1-204ENST00000464553 IPPKQ9H8X2 491 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 COPS7BQ9H9Q2 264 aaPredicted RBP15.29■□□□□ 0.04
SSNA1-204ENST00000464553 AGPAT4Q9NRZ5 378 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 PPT2Q9UMR5 302 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 DAPP1Q9UN19 280 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 ASB1Q9Y576 335 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 PCDHGB6Q9Y5F9 930 aa15.29■□□□□ 0.04
SSNA1-204ENST00000464553 TNRC6AQ8NDV7 1962 aaKnown RBP15.28■□□□□ 0.04
SSNA1-204ENST00000464553 IQANK1A0A1B0GTG1 560 aa15.28■□□□□ 0.04
SSNA1-204ENST00000464553 SEC24DO94855 1032 aaPredicted RBP15.28■□□□□ 0.04
SSNA1-204ENST00000464553 SCELO95171 688 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms