RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 UCK2Q9BZX2 261 aa14.3□□□□□ -0.12
CMSS1-202ENST00000463526 DEFB127Q9H1M4 99 aa14.3□□□□□ -0.12
CMSS1-202ENST00000463526 LIN28AQ9H9Z2 209 aaKnown RBP14.3□□□□□ -0.12
CMSS1-202ENST00000463526 MCCC2Q9HCC0 563 aa14.3□□□□□ -0.12
CMSS1-202ENST00000463526 VWA7Q9Y334 891 aa14.3□□□□□ -0.12
CMSS1-202ENST00000463526 CELSR1Q9NYQ6 3014 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 IGKV3D-11A0A0A0MRZ8 115 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 NKX2-6A6NCS4 301 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 USP27XA6NNY8 438 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 C4orf51C9J302 202 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 CDK2AP1O14519 115 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 ITGA10O75578 1167 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 TFEBP19484 476 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 PPP2R1BP30154 601 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 CLCN2P51788 898 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 NR0B1P51843 470 aaKnown RBP14.29□□□□□ -0.12
CMSS1-202ENST00000463526 CYP1B1Q16678 543 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 CMPK2Q5EBM0 449 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 C16orf47Q6ZP98 133 aaPredicted RBP14.29□□□□□ -0.12
CMSS1-202ENST00000463526 TRPV3Q8NET8 790 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 B3GNT7Q8NFL0 401 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 OR52N2Q8NGI0 321 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 CCT6BQ92526 530 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 CERS2Q96G23 380 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 SLC6A16Q9GZN6 736 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 AICDAQ9GZX7 198 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 PELI2Q9HAT8 420 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 ASIC3Q9UHC3 531 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 ERVK-11Q9UQG0 969 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 SLC22A14Q9Y267 594 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 PPP2R2CQ9Y2T4 447 aa14.29□□□□□ -0.12
CMSS1-202ENST00000463526 MYOCOSA0A1B0GUC4 107 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 PGRMC1O00264 195 aaKnown RBP14.28□□□□□ -0.12
CMSS1-202ENST00000463526 TTC4O95801 387 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 SMIM10L1P0DMW3 83 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 TESK1Q15569 626 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 TEDDM1Q5T9Z0 273 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 TMEM211Q6ICI0 200 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 KIAA0408Q6ZU52 694 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 CCDC71Q8IV32 467 aaPredicted RBP14.28□□□□□ -0.12
CMSS1-202ENST00000463526 CNTN4Q8IWV2 1026 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 RPRMLQ8N4K4 120 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 APCDD1LQ8NCL9 501 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 CREB3L4Q8TEY5 395 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 GRK7Q8WTQ7 553 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 NCLNQ969V3 563 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 SMIM10Q96HG1 83 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 FAR2Q96K12 515 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 NAP1L3Q99457 506 aaPredicted RBP14.28□□□□□ -0.12
CMSS1-202ENST00000463526 EGFL8Q99944 293 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 CLK4Q9HAZ1 481 aaKnown RBP14.28□□□□□ -0.12
CMSS1-202ENST00000463526 PRTFDC1Q9NRG1 225 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 KCMF1Q9P0J7 381 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 RNF6Q9Y252 685 aa14.28□□□□□ -0.12
CMSS1-202ENST00000463526 NPEPPSL1A6NEC2 478 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 CDC7O00311 574 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 FANCGO15287 622 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 PRKNO60260 465 aaPredicted RBP14.27□□□□□ -0.13
CMSS1-202ENST00000463526 SERPINA6P08185 405 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 ENO2P09104 434 aaPredicted RBP14.27□□□□□ -0.13
CMSS1-202ENST00000463526 SSR4P51571 173 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 PLGLB1Q02325 96 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 RUNX2Q13950 521 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 C18orf21Q32NC0 220 aaPredicted RBP14.27□□□□□ -0.13
CMSS1-202ENST00000463526 FAM45BPQ6NSW5 357 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 TRMT10BQ6PF06 316 aaKnown RBP14.27□□□□□ -0.13
CMSS1-202ENST00000463526 SBSNQ6UWP8 590 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 CLNKQ7Z7G1 428 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 LRRC8AQ8IWT6 810 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 FAM45AQ8TCE6 357 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 ASB5Q8WWX0 329 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 RND1Q92730 232 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 PWWP2AQ96N64 755 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 CCDC77Q9BR77 488 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 TIMMDC1Q9NPL8 285 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 DEPPQ9NTK1 212 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 ZNF223Q9UK11 482 aaPredicted RBP14.27□□□□□ -0.13
CMSS1-202ENST00000463526 JRKLQ9Y4A0 524 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 KCNE2Q9Y6J6 123 aa14.27□□□□□ -0.13
CMSS1-202ENST00000463526 MED13LQ71F56 2210 aa14.26□□□□□ -0.13
CMSS1-202ENST00000463526 FAM166BA8MTA8 275 aa14.26□□□□□ -0.13
CMSS1-202ENST00000463526 G3V3Y1 287 aa14.26□□□□□ -0.13
CMSS1-202ENST00000463526 TGFBR3LH3BV60 316 aa14.26□□□□□ -0.13
CMSS1-202ENST00000463526 DNALI1O14645 258 aaPredicted RBP14.26□□□□□ -0.13
CMSS1-202ENST00000463526 H2AFYO75367 372 aaKnown RBP14.26□□□□□ -0.13
CMSS1-202ENST00000463526 GDF5P43026 501 aa14.26□□□□□ -0.13
CMSS1-202ENST00000463526 FNTAP49354 379 aa14.26□□□□□ -0.13
CMSS1-202ENST00000463526 HNRNPFP52597 415 aaKnown RBP14.26□□□□□ -0.13
CMSS1-202ENST00000463526 PPIAP62937 165 aaKnown RBP14.26□□□□□ -0.13
CMSS1-202ENST00000463526 PMPCAQ10713 525 aa14.26□□□□□ -0.13
CMSS1-202ENST00000463526 SLC13A2Q13183 592 aa14.26□□□□□ -0.13
CMSS1-202ENST00000463526 ZNF460Q14592 562 aa14.26□□□□□ -0.13
CMSS1-202ENST00000463526 IL20RBQ6UXL0 311 aa14.26□□□□□ -0.13
CMSS1-202ENST00000463526 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.26□□□□□ -0.138e-7■■■■■ 123.8
CMSS1-202ENST00000463526 ARMC10Q8N2F6 343 aa14.26□□□□□ -0.13
CMSS1-202ENST00000463526 FAM47BQ8NA70 645 aa14.26□□□□□ -0.13
CMSS1-202ENST00000463526 ZFP62Q8NB50 900 aaPredicted RBP14.26□□□□□ -0.13
CMSS1-202ENST00000463526 ACBD4Q8NC06 268 aa14.26□□□□□ -0.13
CMSS1-202ENST00000463526 TMEM52Q8NDY8 209 aa14.26□□□□□ -0.13
CMSS1-202ENST00000463526 C16orf52Q8NHV5 167 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms