RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 DMRT3Q9NQL9 472 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 MKS1Q9NXB0 559 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 PSD3Q9NYI0 1048 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 ADGRE2Q9UHX3 823 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 GRID1Q9ULK0 1009 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 PCDHGA9Q9Y5G4 932 aaKnown RBP16.68■□□□□ 0.26
VPS52-214ENST00000463486 PCDHGA11Q9Y5H2 935 aa16.68■□□□□ 0.26
VPS52-214ENST00000463486 PRRC2CQ9Y520 2896 aaKnown RBP16.67■□□□□ 0.26
VPS52-214ENST00000463486 MAGEB17A8MXT2 336 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 FAM227AF5H4B4 570 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 PEX12O00623 359 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 ALOX12BO75342 701 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 ETHE1O95571 254 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 TGFB1P01137 390 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 HEXBP07686 556 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 FHP07954 510 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 CYC1P08574 325 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 SFTPCP11686 197 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 PCNAP12004 261 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 CREB1P16220 341 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 TAC1P20366 129 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 NEK2P51955 445 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 CLCQ05315 142 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 IFFO1Q0D2I5 559 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 GGTA1PQ4G0N0 100 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 TMEM35AQ53FP2 167 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 KHDRBS2Q5VWX1 349 aaKnown RBP16.67■□□□□ 0.26
VPS52-214ENST00000463486 TCTN3Q6NUS6 607 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 LETMD1Q6P1Q0 360 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 ZNF793Q6ZN11 406 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 PLPP5Q8NEB5 264 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 FDCSPQ8NFU4 85 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 OR4F6Q8NGB9 312 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 FER1L6-AS2Q96M78 137 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 MTERF1Q99551 399 aaKnown RBP16.67■□□□□ 0.26
VPS52-214ENST00000463486 NPLQ9BXD5 320 aaPredicted RBP16.67■□□□□ 0.26
VPS52-214ENST00000463486 ZNF717Q9BY31 904 aaPredicted RBP16.67■□□□□ 0.26
VPS52-214ENST00000463486 RBCK1Q9BYM8 510 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 OR51B5Q9H339 312 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 KCMF1Q9P0J7 381 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 PPT2Q9UMR5 302 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 CLDN16Q9Y5I7 305 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 DOCK10Q96BY6 2186 aa16.67■□□□□ 0.26
VPS52-214ENST00000463486 IGHV1-45A0A0A0MS14 117 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 MKRN2OSH3BPM6 223 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 FOXE1O00358 373 aaPredicted RBP16.66■□□□□ 0.26
VPS52-214ENST00000463486 RTCAO00442 366 aaKnown RBP16.66■□□□□ 0.26
VPS52-214ENST00000463486 COPEO14579 308 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 PCDH17O14917 1159 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 SH3BGRLO75368 114 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 SCELO95171 688 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 ACPPP15309 386 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 CCNG1P51959 295 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 SKP1P63208 163 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 PCOLCEQ15113 449 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 CCDC153Q494R4 210 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 TNFAIP8L3Q5GJ75 292 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 FAAH2Q6GMR7 532 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 LANCL3Q6ZV70 420 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 MILR1Q7Z6M3 343 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 MYLK4Q86YV6 388 aaPredicted RBP16.66■□□□□ 0.26
VPS52-214ENST00000463486 SLC22A9Q8IVM8 553 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 GALNT16Q8N428 558 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 C9orf43Q8TAL5 461 aaPredicted RBP16.66■□□□□ 0.26
VPS52-214ENST00000463486 TRPC4APQ8TEL6 797 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 CMTM7Q96FZ5 175 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 IMMP1LQ96LU5 166 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 KCNC2Q96PR1 638 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 WDR77Q9BQA1 342 aaPredicted RBP16.66■□□□□ 0.26
VPS52-214ENST00000463486 TBCDQ9BTW9 1192 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 NUDT9Q9BW91 350 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 HELZ2Q9BYK8 2649 aaKnown RBP16.66■□□□□ 0.26
VPS52-214ENST00000463486 ZNF700Q9H0M5 742 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 GSTO2Q9H4Y5 243 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 ATP13A2Q9NQ11 1180 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 ZNF71Q9NQZ8 489 aaPredicted RBP16.66■□□□□ 0.26
VPS52-214ENST00000463486 TP53TG5Q9Y2B4 290 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 PLLPQ9Y342 182 aa16.66■□□□□ 0.26
VPS52-214ENST00000463486 FASNP49327 2511 aaKnown RBP16.65■□□□□ 0.26
VPS52-214ENST00000463486 IGKV3D-11A0A0A0MRZ8 115 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 CYR61O00622 381 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 CDC123O75794 336 aaPredicted RBP16.65■□□□□ 0.26
VPS52-214ENST00000463486 SUPT7LO94864 414 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 HPP00738 406 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 C8orf89P0DMQ9 161 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 RNH1P13489 461 aaKnown RBP16.65■□□□□ 0.26
VPS52-214ENST00000463486 NR1D1P20393 614 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 ATP5A1P25705 553 aaKnown RBP16.65■□□□□ 0.26
VPS52-214ENST00000463486 CERS1P27544 350 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 HPDP32754 393 aaPredicted RBP16.65■□□□□ 0.26
VPS52-214ENST00000463486 HNRNPFP52597 415 aaKnown RBP16.65■□□□□ 0.26
VPS52-214ENST00000463486 RPS13P62277 151 aaKnown RBP16.65■□□□□ 0.26
VPS52-214ENST00000463486 BTG2P78543 158 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 TUBB8Q3ZCM7 444 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 MINDY4Q4G0A6 757 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 TRIM40Q6P9F5 258 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 CHSY3Q70JA7 882 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 NDUFAF7Q7L592 441 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 ANKRD37Q7Z713 158 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 TMEM52Q8NDY8 209 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms