RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 RAP1GDS1P52306 607 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 BTN3A2P78410 334 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 TGM3Q08188 693 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 RUNX2Q13950 521 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 HERC3Q15034 1050 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 FAM214AQ32MH5 1076 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 YOD1Q5VVQ6 348 aaPredicted RBP13.61□□□□□ -0.23
COL6A1-202ENST00000463060 FAM91A1Q658Y4 838 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 TLDC1Q6P9B6 456 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 CYP20A1Q6UW02 462 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 ABHD13Q7L211 337 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 PAGE2Q7Z2X7 111 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 RIMKLAQ8IXN7 391 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 LIX1Q8N485 282 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 N4BP2L2Q92802 583 aaPredicted RBP13.61□□□□□ -0.23
COL6A1-202ENST00000463060 TM4SF18Q96CE8 201 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 EGLN2Q96KS0 407 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 MARK4Q96L34 752 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 CATSPER2Q96P56 530 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 DEPDC7Q96QD5 511 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 STRADBQ9C0K7 418 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 ROGDIQ9GZN7 287 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 APMAPQ9HDC9 416 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 BAIAP2L1Q9UHR4 511 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 EXO1Q9UQ84 846 aaKnown RBP13.61□□□□□ -0.23
COL6A1-202ENST00000463060 CLCA2Q9UQC9 943 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 EIF3LQ9Y262 564 aaKnown RBP13.61□□□□□ -0.23
COL6A1-202ENST00000463060 ASB4Q9Y574 426 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 KNTC1P50748 2209 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 CNOT1A5YKK6 2376 aaKnown RBP13.6□□□□□ -0.23
COL6A1-202ENST00000463060 ZNF749O43361 778 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 PCDH7O60245 1069 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 CCDC22O60826 627 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 MYO1DO94832 1006 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 TIAF1O95411 115 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 NSA2O95478 260 aaKnown RBP13.6□□□□□ -0.23
COL6A1-202ENST00000463060 GBAP04062 536 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 CD1EP15812 388 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 NCF2P19878 526 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-202ENST00000463060 MAPK1P28482 360 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 ADSLP30566 484 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-202ENST00000463060 SSR2P43308 183 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 MTTPP55157 894 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 CLDN8P56748 225 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 C21orf58P58505 322 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 TRA2BP62995 288 aaKnown RBP13.6□□□□□ -0.23
COL6A1-202ENST00000463060 NDUFA9Q16795 377 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 RSPO4Q2I0M5 234 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-202ENST00000463060 MUM1Q2TAK8 710 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL6A1-202ENST00000463060 DEFB134Q4QY38 66 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 PDCD4Q53EL6 469 aaKnown RBP13.6□□□□□ -0.23
COL6A1-202ENST00000463060 PRAMEF17Q5VTA0 474 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 PWWP2BQ6NUJ5 590 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 C6orf89Q6UWU4 347 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 TMPRSS12Q86WS5 348 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 NUDT13Q86X67 352 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 FUNDC1Q8IVP5 155 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 GPR135Q8IZ08 494 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 DTWD1Q8N5C7 304 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 FITM2Q8N6M3 262 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 SLC38A9Q8NBW4 561 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 ZCCHC10Q8TBK6 192 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 PROKR1Q8TCW9 393 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 C16orf78Q8WTQ4 265 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 ADAMTS14Q8WXS8 1223 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 TEX37Q96LM6 180 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 SERINC2Q96SA4 455 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 CMKLR1Q99788 373 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 CCDC106Q9BWC9 280 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 CLK4Q9HAZ1 481 aaKnown RBP13.6□□□□□ -0.23
COL6A1-202ENST00000463060 FANCEQ9HB96 536 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 CUTCQ9NTM9 273 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 TMEM45AQ9NWC5 275 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 SCN3AQ9NY46 2000 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 DLL3Q9NYJ7 618 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 CDV3Q9UKY7 258 aaKnown RBP13.6□□□□□ -0.23
COL6A1-202ENST00000463060 RARRES3Q9UL19 164 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 G3BP2Q9UN86 482 aaKnown RBP13.6□□□□□ -0.23
COL6A1-202ENST00000463060 WBP11Q9Y2W2 641 aaKnown RBP13.6□□□□□ -0.23
COL6A1-202ENST00000463060 NAALAD2Q9Y3Q0 740 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 TMEM184BQ9Y519 407 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-202ENST00000463060 PCDHB3Q9Y5E6 796 aa13.6□□□□□ -0.23
COL6A1-202ENST00000463060 CAPN14A8MX76 684 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 DSCR3O14972 297 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 SLC22A2O15244 555 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 DCTN3O75935 186 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 ONECUT2O95948 504 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 FAM58BPP0C7Q3 252 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 IL1RNP18510 177 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 ITGAXP20702 1163 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 IL12AP29459 219 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 ETV5P41161 510 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 GSTM5P46439 218 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 ARSFP54793 590 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 FOXM1Q08050 763 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 ZNF763Q0D2J5 394 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 KLF10Q13118 480 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 SLAMF1Q13291 335 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 PTGR1Q14914 329 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms