RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 NPLQ9BXD5 320 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-210ENST00000462125 FUT8Q9BYC5 575 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 CD244Q9BZW8 370 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 RHBGQ9H310 441 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 IGSF5Q9NSI5 407 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 ZNF446Q9NWS9 450 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 WWOXQ9NZC7 414 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 CD274Q9NZQ7 290 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 RNF112Q9ULX5 631 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 ACOT9Q9Y305 439 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 USP9XQ93008 2570 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-210ENST00000462125 LRRK2Q5S007 2527 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 IGKV3D-11A0A0A0MRZ8 115 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 BLACEA4D250 179 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 OR5H15A6NDH6 313 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 ANKDD1BA6NHY2 528 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 A8MUI8 341 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 CDK2AP1O14519 115 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 PRMT3O60678 531 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 B4GALT2O60909 372 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 C2P06681 752 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 GP1BBP13224 206 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 RNH1P13489 461 aaKnown RBP12.41□□□□□ -0.42
C9orf3-210ENST00000462125 MTHFD2P13995 350 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 EDN3P14138 238 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 TFEBP19484 476 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 CD22P20273 847 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 HNRNPH1P31943 449 aaKnown RBP12.41□□□□□ -0.42
C9orf3-210ENST00000462125 OR4D2P58180 307 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 SLC26A5P58743 744 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 BTN3A2P78410 334 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 BTG2P78543 158 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 LAPTM5Q13571 262 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 RUNX2Q13950 521 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 DOC2AQ14183 400 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 EFTUD2Q15029 972 aaKnown RBP eCLIP12.41□□□□□ -0.424e-7■■■■□ 19.4
C9orf3-210ENST00000462125 INAQ16352 499 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 PDK4Q16654 411 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 FBXO48Q5FWF7 155 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 ACER2Q5QJU3 275 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 CEP128Q6ZU80 1094 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 RAPH1Q70E73 1250 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 VN1R5Q7Z5H4 357 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 TBC1D1Q86TI0 1168 aaPredicted RBP12.41□□□□□ -0.42
C9orf3-210ENST00000462125 CA13Q8N1Q1 262 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 RHEBL1Q8TAI7 183 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 ELP5Q8TE02 316 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 SSC4DQ8WTU2 575 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 NXNL1Q96CM4 212 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 PTCHD1Q96NR3 888 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 QRFPRQ96P65 431 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 SLX1AQ9BQ83 275 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 EFCAB11Q9BUY7 163 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 RBCK1Q9BYM8 510 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 TSPYL1Q9H0U9 437 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 ALG9Q9H6U8 611 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 KCNK13Q9HB14 408 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 PRDM9Q9NQV7 894 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 NUDT4Q9NZJ9 180 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 DMGDHQ9UI17 866 aaKnown RBP12.41□□□□□ -0.42
C9orf3-210ENST00000462125 PCDHGB6Q9Y5F9 930 aa12.41□□□□□ -0.42
C9orf3-210ENST00000462125 SCN2AQ99250 2005 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 TCRBV16S1A1N1A0A5B0 115 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 FAM227AF5H4B4 570 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 E2F3O00716 465 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 KERAO60938 352 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 DDAH2O95865 285 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 MYBL2P10244 700 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 HPDP32754 393 aaPredicted RBP12.4□□□□□ -0.42
C9orf3-210ENST00000462125 ZNF33BQ06732 778 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 SLMAPQ14BN4 828 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 XKR6Q5GH73 641 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 MROH9Q5TGP6 573 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 LRRC70Q7Z2Q7 622 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 CENPLQ8N0S6 344 aaPredicted RBP12.4□□□□□ -0.42
C9orf3-210ENST00000462125 LGI4Q8N135 537 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 BCORP1Q8N888 145 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 NFAM1Q8NET5 270 aaPredicted RBP12.4□□□□□ -0.42
C9orf3-210ENST00000462125 OR2L5Q8NG80 312 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 CAVIN3Q969G5 261 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 FAR2Q96K12 515 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 TAAR6Q96RI8 345 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 NPAS2Q99743 824 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 REXO4Q9GZR2 422 aaKnown RBP12.4□□□□□ -0.42
C9orf3-210ENST00000462125 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.4□□□□□ -0.422e-7■■■■□ 20.8
C9orf3-210ENST00000462125 ACSS3Q9H6R3 686 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 NECTIN3Q9NQS3 549 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 PRDM7Q9NQW5 492 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 FAM53CQ9NYF3 392 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 NINJ2Q9NZG7 142 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 MTRF1LQ9UGC7 380 aaKnown RBP12.4□□□□□ -0.42
C9orf3-210ENST00000462125 MMACHCQ9Y4U1 282 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 ASB1Q9Y576 335 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 POLEQ07864 2286 aa12.4□□□□□ -0.42
C9orf3-210ENST00000462125 A0A087X1B8 175 aa12.39□□□□□ -0.43
C9orf3-210ENST00000462125 PSMD12O00232 456 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-210ENST00000462125 ERI3O43414 337 aaKnown RBP12.39□□□□□ -0.43
C9orf3-210ENST00000462125 KLK8O60259 260 aa12.39□□□□□ -0.43
C9orf3-210ENST00000462125 CCNT2O60583 730 aaKnown RBP12.39□□□□□ -0.43
C9orf3-210ENST00000462125 PRAMEF2O60811 474 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms