RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 E2F3O00716 465 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 ERI3O43414 337 aaKnown RBP16.78■□□□□ 0.28
MSH6-207ENST00000456246 CCNT2O60583 730 aaKnown RBP16.78■□□□□ 0.28
MSH6-207ENST00000456246 PRAMEF2O60811 474 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 SEMA7AO75326 666 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 FAM155BO75949 473 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 B3GALT4O96024 378 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 SLC26A5P58743 744 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 BTN3A2P78410 334 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 IRF8Q02556 426 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 RCN2Q14257 317 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 FAM83EQ2M2I3 478 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 ADPRMQ3LIE5 342 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 ISCA2Q86U28 154 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 CTAGE6Q86UF2 777 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 SHISA5Q8N114 240 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 MMGT1Q8N4V1 131 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 SRFBP1Q8NEF9 429 aaKnown RBP16.78■□□□□ 0.28
MSH6-207ENST00000456246 OR2L5Q8NG80 312 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 RHEBL1Q8TAI7 183 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 UBTD2Q8WUN7 234 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 UBE2E3Q969T4 207 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 MS4A6EQ96DS6 147 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 MAGEB10Q96LZ2 347 aaPredicted RBP16.78■□□□□ 0.28
MSH6-207ENST00000456246 SLX1AQ9BQ83 275 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 ROGDIQ9GZN7 287 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 REXO4Q9GZR2 422 aaKnown RBP16.78■□□□□ 0.28
MSH6-207ENST00000456246 RHBGQ9H310 441 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 KLHL31Q9H511 634 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 MRPS33Q9Y291 106 aaKnown RBP16.78■□□□□ 0.28
MSH6-207ENST00000456246 SVILO95425 2214 aa16.78■□□□□ 0.28
MSH6-207ENST00000456246 ICE1Q9Y2F5 2266 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 NAV2Q8IVL1 2488 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 IGKV3D-11A0A0A0MRZ8 115 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 TCRBV16S1A1N1A0A5B0 115 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 CLDN4O14493 209 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 B3GALT2O43825 422 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 CRYABP02511 175 aaKnown RBP16.77■□□□□ 0.28
MSH6-207ENST00000456246 SERPINB1P30740 379 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 HNRNPH1P31943 449 aaKnown RBP16.77■□□□□ 0.28
MSH6-207ENST00000456246 CASP2P42575 452 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 DOC2AQ14183 400 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 E2F2Q14209 437 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 TERF2Q15554 542 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 CA13Q8N1Q1 262 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 HORMAD2Q8N7B1 307 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 DNAJB8Q8NHS0 232 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 EXT2Q93063 718 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 C5orf34Q96MH7 638 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 SERINC2Q96SA4 455 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 ATOH8Q96SQ7 321 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 COPS7BQ9H9Q2 264 aaPredicted RBP16.77■□□□□ 0.28
MSH6-207ENST00000456246 OPTCQ9UBM4 332 aa16.77■□□□□ 0.28
MSH6-207ENST00000456246 SAGE2PA6NJ88 616 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 SUPT3HB4E1H0 165 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 C4orf51C9J302 202 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 K7EPI3 171 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 SUPT3HO75486 399 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 RASAL1O95294 804 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 HSD17B7P56937 341 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 RAB38P57729 211 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 PCDH1Q08174 1060 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 CHIT1Q13231 466 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 EFTUD2Q15029 972 aaKnown RBP eCLIP16.76■□□□□ 0.272e-7■■■□□ 17.5
MSH6-207ENST00000456246 GLE1Q53GS7 698 aaKnown RBP16.76■□□□□ 0.27
MSH6-207ENST00000456246 KLC3Q6P597 504 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 CRLF3Q8IUI8 442 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 ELP5Q8TE02 316 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 NR4A3Q92570 626 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 ZNF592Q92610 1267 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 ESAMQ96AP7 390 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 UTP23Q9BRU9 249 aaKnown RBP16.76■□□□□ 0.27
MSH6-207ENST00000456246 AICDAQ9GZX7 198 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 ACSS3Q9H6R3 686 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 IGSF5Q9NSI5 407 aa16.76■□□□□ 0.27
MSH6-207ENST00000456246 DNAJB6O75190 326 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 CTAGE8P0CG41 777 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 KCNC1P48547 511 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 SERPINB8P50452 374 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 MTTPP55157 894 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 PER3P56645 1201 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 DLG1Q12959 904 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 ACAP2Q15057 778 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 FBXO48Q5FWF7 155 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 MROH9Q5TGP6 573 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 ZNF324BQ6AW86 544 aaPredicted RBP16.75■□□□□ 0.27
MSH6-207ENST00000456246 TAOK1Q7L7X3 1001 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 SCUBE1Q8IWY4 988 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 CTAGE4Q8IX94 777 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 ZNF595Q8IYB9 648 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 CYP4X1Q8N118 509 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 BEST3Q8N1M1 668 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 C7orf57Q8NEG2 295 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 QRFPRQ96P65 431 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 KCNC2Q96PR1 638 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 FMO2Q99518 471 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 FUT8Q9BYC5 575 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 SNX15Q9NRS6 342 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 NINJ2Q9NZG7 142 aa16.75■□□□□ 0.27
MSH6-207ENST00000456246 ADGRE2Q9UHX3 823 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms