RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 TRIM33Q9UPN9 1127 aa10.68□□□□□ -0.7
TRAF4-206ENST00000454852 EIF3LQ9Y262 564 aaKnown RBP10.68□□□□□ -0.7
TRAF4-206ENST00000454852 ARL2BPQ9Y2Y0 163 aa10.68□□□□□ -0.7
TRAF4-206ENST00000454852 MRPS2Q9Y399 296 aaKnown RBP10.68□□□□□ -0.7
TRAF4-206ENST00000454852 PTPRBP23467 1997 aa10.68□□□□□ -0.7
TRAF4-206ENST00000454852 DMXL1Q9Y485 3027 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 GOLGA8QA0A0J9YX86 632 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 A0A1B0GX78 115 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 GOLGA8OA6NCC3 632 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 GOLGA8NF8WBI6 632 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 ANKRD28O15084 1053 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 HYAL3O43820 417 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-206ENST00000454852 PRMT3O60678 531 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 SCRG1O75711 98 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 IDO1P14902 403 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 ADSLP30566 484 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-206ENST00000454852 RORAP35398 523 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 SSR2P43308 183 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 PLA2G16P53816 162 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 SNRPNP63162 240 aaKnown RBP10.67□□□□□ -0.7
TRAF4-206ENST00000454852 FOXM1Q08050 763 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 TARDBPQ13148 414 aaKnown RBP eCLIP10.67□□□□□ -0.7
TRAF4-206ENST00000454852 PUM1Q14671 1186 aaKnown RBP eCLIP10.67□□□□□ -0.7
TRAF4-206ENST00000454852 GSTA3Q16772 222 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 GALNTL6Q49A17 601 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 DCAF12Q5T6F0 453 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 ZNF385CQ66K41 422 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-206ENST00000454852 PWWP2BQ6NUJ5 590 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 ZNF517Q6ZMY9 492 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-206ENST00000454852 IKBIPQ70UQ0 350 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 CLNKQ7Z7G1 428 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 PDSS2Q86YH6 399 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 CPSF7Q8N684 471 aaKnown RBP10.67□□□□□ -0.7
TRAF4-206ENST00000454852 ACOT4Q8N9L9 421 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 FNDC5Q8NAU1 212 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 BCAS4Q8TDM0 211 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 THOC1Q96FV9 657 aaKnown RBP10.67□□□□□ -0.7
TRAF4-206ENST00000454852 ZNF764Q96H86 408 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-206ENST00000454852 C17orf62Q9BQA9 187 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 DPH2Q9BQC3 489 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-206ENST00000454852 NDC1Q9BTX1 674 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 SPRY4Q9C004 299 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 FAM107BQ9H098 131 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 ANKHQ9HCJ1 492 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 LYRM4Q9HD34 91 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 APMAPQ9HDC9 416 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 SDR39U1Q9NRG7 319 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-206ENST00000454852 STARD5Q9NSY2 213 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 AIG1Q9NVV5 245 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 LYARQ9NX58 379 aaKnown RBP10.67□□□□□ -0.7
TRAF4-206ENST00000454852 SLC39A1Q9NY26 324 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 GIMAP2Q9UG22 337 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 CDC14AQ9UNH5 594 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 MAPRE3Q9UPY8 281 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 GPR45Q9Y5Y3 372 aa10.67□□□□□ -0.7
TRAF4-206ENST00000454852 CNOT1A5YKK6 2376 aaKnown RBP10.66□□□□□ -0.7
TRAF4-206ENST00000454852 SAP18O00422 153 aaKnown RBP10.66□□□□□ -0.7
TRAF4-206ENST00000454852 RTCAO00442 366 aaKnown RBP10.66□□□□□ -0.7
TRAF4-206ENST00000454852 NDUFAB1O14561 156 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 UBDO15205 165 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 SLC22A2O15244 555 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 B3GALT2O43825 422 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 PCDH7O60245 1069 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 TBX19O60806 448 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 CPNE3O75131 537 aaKnown RBP10.66□□□□□ -0.7
TRAF4-206ENST00000454852 EEDO75530 441 aaKnown RBP10.66□□□□□ -0.7
TRAF4-206ENST00000454852 DXOO77932 396 aaKnown RBP10.66□□□□□ -0.7
TRAF4-206ENST00000454852 TIAF1O95411 115 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 STATHP02808 62 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 KLK1P06870 262 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 ANXA4P09525 319 aaPredicted RBP10.66□□□□□ -0.7
TRAF4-206ENST00000454852 BCKDHAP12694 445 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 SDC1P18827 310 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 ETV5P41161 510 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 ASMTP46597 345 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 AVPR1BP47901 424 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 DIO3P55073 304 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 CLDN6P56747 220 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 RAB8AP61006 207 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 ZNF763Q0D2J5 394 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 DSG2Q14126 1118 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 MAP7Q14244 749 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 SLC9A5Q14940 896 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 DEFB134Q4QY38 66 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 PDCD4Q53EL6 469 aaKnown RBP10.66□□□□□ -0.7
TRAF4-206ENST00000454852 IL23RQ5VWK5 629 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 DGLUCYQ7Z3D6 616 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 ALYREFQ86V81 257 aaKnown RBP10.66□□□□□ -0.7
TRAF4-206ENST00000454852 TMEM126BQ8IUX1 230 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 ZCCHC10Q8TBK6 192 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 ADAMTS18Q8TE60 1221 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 PPP1R36Q96LQ0 422 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 RILPQ96NA2 401 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 GBP5Q96PP8 586 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 FAM117AQ9C073 453 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 MYLK2Q9H1R3 596 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 ACTR5Q9H9F9 607 aaPredicted RBP10.66□□□□□ -0.7
TRAF4-206ENST00000454852 COPS7BQ9H9Q2 264 aaPredicted RBP10.66□□□□□ -0.7
TRAF4-206ENST00000454852 POLR1BQ9H9Y6 1135 aa10.66□□□□□ -0.7
TRAF4-206ENST00000454852 MYNNQ9NPC7 610 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms