RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 PSD4Q8NDX1 1056 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 NFAM1Q8NET5 270 aaPredicted RBP5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 OR10Q1Q8NGQ4 319 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 UTP15Q8TED0 518 aaKnown RBP5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CCT6BQ92526 530 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TM4SF19Q96DZ7 209 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 MS4A14Q96JA4 679 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SERPINB12Q96P63 405 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 OR1F2PQ96R84 312 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SMC6Q96SB8 1091 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 OLFM1Q99784 485 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 EBNA1BP2Q99848 306 aaKnown RBP5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 AARSD1Q9BTE6 412 aaKnown RBP5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SGPP1Q9BX95 441 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DEFB126Q9BYW3 111 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 LZTFL1Q9NQ48 299 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HOMER3Q9NSC5 361 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TMEM184CQ9NVA4 438 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 INTS10Q9NVR2 710 aaKnown RBP5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ARL15Q9NXU5 204 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 Q9UFV3 132 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FBXO5Q9UKT4 447 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ERVK-11Q9UQG0 969 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DRG1Q9Y295 367 aaKnown RBP5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 VPS9D1Q9Y2B5 631 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 KLF13Q9Y2Y9 288 aaPredicted RBP5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DHRS7Q9Y394 339 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 L3MBTL1Q9Y468 752 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CLDN16Q9Y5I7 305 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 MPDZO75970 2070 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 KCNE1BA0A087WTH5 132 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FAM237BA0A1B0GVD1 139 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ATP6AP2A0A1C7CYW4 349 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PSMD12O00232 456 aaPredicted RBP5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FCHO1O14526 889 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PFDN6O15212 129 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SH3BGRLO75368 114 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ATP6AP2O75787 350 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PIAS1O75925 651 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TUBB4AP04350 444 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CYC1P08574 325 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CCL3P10147 92 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 MYBL2P10244 700 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RNH1P13489 461 aaKnown RBP5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CD99P14209 185 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DRD2P14416 443 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CD1EP15812 388 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 NPPBP16860 134 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ENDOUP21128 410 aaKnown RBP5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 JAK1P23458 1154 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 GABRB3P28472 473 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HNRNPH1P31943 449 aaKnown RBP5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TRHRP34981 398 aaPredicted RBP5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 GRK3P35626 688 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 NPY2RP49146 381 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PPIAP62937 165 aaKnown RBP5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RGS1Q08116 209 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CRYMQ14894 314 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CCNG2Q16589 344 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ZNF750Q32MQ0 723 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PRAMEF20Q5VT98 475 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RTL6Q6ICC9 239 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ARHGAP11AQ6P4F7 1023 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 LCTLQ6UWM7 567 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 QSOX2Q6ZRP7 698 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 IGDCC3Q8IVU1 814 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HOMEZQ8IX15 550 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 LGI4Q8N135 537 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CA13Q8N1Q1 262 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 MYO1HQ8N1T3 1032 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 GPATCH11Q8N954 259 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RELL2Q8NC24 303 aaPredicted RBP5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 B3GNT7Q8NFL0 401 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 OR2M7Q8NG81 312 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SLC5A11Q8WWX8 675 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RND1Q92730 232 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SNF8Q96H20 258 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TCF12Q99081 682 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 WDR83Q9BRX9 315 aaKnown RBP5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TMUB1Q9BVT8 246 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FRMD8P1Q9BZ68 369 aaPredicted RBP5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TTTY12Q9BZ98 90 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SLC6A15Q9H2J7 730 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TP63Q9H3D4 680 aaPredicted RBP5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PLAC1Q9HBJ0 212 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 KCNJ16Q9NPI9 418 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SEMA4BQ9NPR2 832 aaPredicted RBP5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DMRT3Q9NQL9 472 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ZNF358Q9NW07 568 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DNAJB12Q9NXW2 375 aaKnown RBP5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CRIM1Q9NZV1 1036 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ZFATQ9P243 1243 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SPRR3Q9UBC9 169 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SLC22A7Q9Y694 548 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FREM3P0C091 2139 aa5.57□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ARHGAP21Q5T5U3 1957 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ROS1P08922 2347 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TRBC2A0A5B9 178 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 NCF1BA6NI72 391 aaPredicted RBP5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TMEM200CA6NKL6 621 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms