RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 PRDM9Q9NQV7 894 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 RNF112Q9ULX5 631 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 GABRR3A8MPY1 467 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 FAM227AF5H4B4 570 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 CLEC3AO75596 197 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 UNC5CO95185 931 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 STSP08842 583 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 CD46P15529 392 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 STX2P32856 288 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 CD96P40200 585 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 MAGEA4P43358 317 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 TDGF1P3P51864 188 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 KCNK10P57789 538 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 SLMAPQ14BN4 828 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 OR4D1Q15615 310 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 ZKSCAN8Q15776 578 aaPredicted RBP12.09□□□□□ -0.47
CHD3-206ENST00000452447 PDK4Q16654 411 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 XKR6Q5GH73 641 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 SPINK14Q6IE38 97 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 FJX1Q86VR8 437 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 RPS19BP1Q86WX3 136 aaKnown RBP12.09□□□□□ -0.47
CHD3-206ENST00000452447 LGI4Q8N135 537 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 CA13Q8N1Q1 262 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 STAG3L4Q8TBR4 150 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 ELP5Q8TE02 316 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 EXT2Q93063 718 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 KIAA1191Q96A73 305 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 ESAMQ96AP7 390 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 UBXN10Q96LJ8 280 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 TMEM79Q9BSE2 394 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 NPLQ9BXD5 320 aaPredicted RBP12.09□□□□□ -0.47
CHD3-206ENST00000452447 REXO4Q9GZR2 422 aaKnown RBP12.09□□□□□ -0.47
CHD3-206ENST00000452447 EHD1Q9H4M9 534 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 CDCP1Q9H5V8 836 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 NT5DC2Q9H857 520 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 KLHL1Q9NR64 748 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 SEC14L3Q9UDX4 400 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 PCDHGB6Q9Y5F9 930 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 CROCCQ5TZA2 2017 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 A0A0G2JN53 185 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 TCRBV16S1A1N1A0A5B0 115 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 LRIT2A6NDA9 550 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 A8MUA0 341 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 C4orf51C9J302 202 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 CLDN4O14493 209 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 B3GALT2O43825 422 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 CCNT2O60583 730 aaKnown RBP12.08□□□□□ -0.48
CHD3-206ENST00000452447 COL8A1P27658 744 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 EEF1DP29692 281 aaKnown RBP12.08□□□□□ -0.48
CHD3-206ENST00000452447 ST13P50502 369 aaKnown RBP12.08□□□□□ -0.48
CHD3-206ENST00000452447 PLA2G16P53816 162 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 PMP22Q01453 160 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 TRADDQ15628 312 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 HIST2H2ACQ16777 129 aaPredicted RBP12.08□□□□□ -0.48
CHD3-206ENST00000452447 PAGE2BQ5JRK9 111 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 C1QL3Q5VWW1 255 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 HIST2H2AA3Q6FI13 130 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 TRIM40Q6P9F5 258 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 TBC1D1Q86TI0 1168 aaPredicted RBP12.08□□□□□ -0.48
CHD3-206ENST00000452447 KIF2BQ8N4N8 673 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 TMEM178AQ8NBL3 297 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 PDPRQ8NCN5 879 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 FBF1Q8TES7 1133 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 MS4A6EQ96DS6 147 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 SIGLEC12Q96PQ1 595 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 EFCAB11Q9BUY7 163 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 AICDAQ9GZX7 198 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 NECTIN3Q9NQS3 549 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 LRFN1Q9P244 771 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 COPG2Q9UBF2 871 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 MRPS33Q9Y291 106 aaKnown RBP12.08□□□□□ -0.48
CHD3-206ENST00000452447 MMACHCQ9Y4U1 282 aa12.08□□□□□ -0.48
CHD3-206ENST00000452447 IGKV3D-11A0A0A0MRZ8 115 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 SAGE2PA6NJ88 616 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 CDK2AP1O14519 115 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 MAN1A2O60476 641 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 ZG16O60844 167 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 FAM155BO75949 473 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 MLYCDO95822 493 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 C1QAP02745 245 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 MST1P26927 711 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 CRABP2P29373 138 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 HNRNPH1P31943 449 aaKnown RBP12.07□□□□□ -0.48
CHD3-206ENST00000452447 IRF8Q02556 426 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 SRSF11Q05519 484 aaKnown RBP12.07□□□□□ -0.48
CHD3-206ENST00000452447 RBPJQ06330 500 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 CKAP4Q07065 602 aaKnown RBP12.07□□□□□ -0.48
CHD3-206ENST00000452447 TGM3Q08188 693 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 SLC13A2Q13183 592 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 LAPTM5Q13571 262 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 DOC2AQ14183 400 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 CMC1Q7Z7K0 106 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 FAM98AQ8NCA5 519 aaKnown RBP12.07□□□□□ -0.48
CHD3-206ENST00000452447 MDS2Q8NDY4 140 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 OR2L5Q8NG80 312 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 ADAMTS18Q8TE60 1221 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 PTCD3Q96EY7 689 aaKnown RBP12.07□□□□□ -0.48
CHD3-206ENST00000452447 PKNOX2Q96KN3 472 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 NPAS2Q99743 824 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 DEFB126Q9BYW3 111 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms