RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 KLHL41O60662 606 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 DPM1O60762 260 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 SCELO95171 688 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 GFAPP14136 432 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 ITGA3P26006 1051 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 BTG2P78543 158 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 GTF2H2Q13888 395 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 DEPDC1Q5TB30 811 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 LGSNQ5TDP6 509 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 PLAG1Q6DJT9 500 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 GTF2H2CQ6P1K8 395 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 MED27Q6P2C8 311 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 ZNF793Q6ZN11 406 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 QSOX2Q6ZRP7 698 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 SCUBE1Q8IWY4 988 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 KBTBD2Q8IY47 623 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 CYP4X1Q8N118 509 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 PTGR2Q8N8N7 351 aaPredicted RBP15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 TMEM52Q8NDY8 209 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 ACMSDQ8TDX5 336 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 PNPLA2Q96AD5 504 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 MIB2Q96AX9 1013 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 THOC3Q96J01 351 aaKnown RBP15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 BARD1Q99728 777 aaKnown RBP15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 TUBB6Q9BUF5 446 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 NTMT1Q9BV86 223 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 REXO4Q9GZR2 422 aaKnown RBP15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 MRPL46Q9H2W6 279 aaKnown RBP15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 RIC8BQ9NVN3 520 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 PSD3Q9NYI0 1048 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 TMEM216Q9P0N5 145 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 PCTPQ9UKL6 214 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 TMCO1Q9UM00 188 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 CSAG2Q9Y5P2 127 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 A0A0G2JN53 185 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 TGFBR3LH3BV60 316 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 WISP1O95388 367 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 RPS17P08708 135 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 ITGAMP11215 1152 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 RNH1P13489 461 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 PIK3CBP42338 1070 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 HNRNPFP52597 415 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 SKP1P63208 163 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 ABRAXAS2Q15018 415 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 NSDHLQ15738 373 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 MINDY4Q4G0A6 757 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 AGAP7PQ5VUJ5 663 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 LCA5Q86VQ0 697 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 RNF175Q8N4F7 328 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 NFAM1Q8NET5 270 aaPredicted RBP15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 HUS1BQ8NHY5 278 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 WDR20Q8TBZ3 569 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 UBE2E3Q969T4 207 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 PHF21BQ96EK2 531 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 NSUN5Q96P11 429 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 AGAP4Q96P64 663 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 ZNF717Q9BY31 904 aaPredicted RBP15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 RBCK1Q9BYM8 510 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 TRIM4Q9C037 500 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 IPPKQ9H8X2 491 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 NECTIN3Q9NQS3 549 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 CPSF2Q9P2I0 782 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 PSMC3IPQ9P2W1 217 aaPredicted RBP15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 ZNF225Q9UK10 706 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 PPT2Q9UMR5 302 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 RNF11Q9Y3C5 154 aa15.14■□□□□ 0.01
SCAMP4-205ENST00000452128 A0A1W2PPM1 405 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 TCRBV16S1A1N1A0A5B0 115 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 A8MT66 165 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 FOXO6A8MYZ6 492 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 PPP6CO00743 305 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 B4GALT2O60909 372 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 CDC123O75794 336 aaPredicted RBP15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 ALPPP05187 535 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 ICAM2P13598 275 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 ATP5A1P25705 553 aaKnown RBP15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 EEF1DP29692 281 aaKnown RBP15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 SERPINB1P30740 379 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 PLA2G16P53816 162 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 MLLT10P55197 1068 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 VSNL1P62760 191 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 TRAF3Q13114 568 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 MFAP5Q13361 173 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 IGFBP7Q16270 282 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 HIST2H2ACQ16777 129 aaPredicted RBP15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 TMEM35AQ53FP2 167 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 HIST2H2AA3Q6FI13 130 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 ISLR2Q6UXK2 745 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 CNPY4Q8N129 248 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 OR52B6Q8NGF0 335 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 BRIX1Q8TDN6 353 aaKnown RBP15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 ZNF483Q8TF39 744 aaPredicted RBP15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 METTL21AQ8WXB1 218 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 SERINC2Q96SA4 455 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 NPAS2Q99743 824 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 TBCDQ9BTW9 1192 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 MFRPQ9BY79 579 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 NOL11Q9H8H0 719 aaKnown RBP15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 ADGRE2Q9UHX3 823 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 EMCNQ9ULC0 261 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms