RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 CCKBRP32239 447 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 FAM53BQ14153 422 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 KCNAB1Q14722 419 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 DPY19L1Q2PZI1 675 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 AGKQ53H12 422 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 LACTB2Q53H82 288 aaPredicted RBP18.3■□□□□ 0.52
RPS28-202ENST00000449223 CCNYL2Q5T2Q4 361 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 NIPAL1Q6NVV3 410 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 ACOT4Q8N9L9 421 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 ZNF501Q96CX3 271 aaPredicted RBP18.3■□□□□ 0.52
RPS28-202ENST00000449223 ZNF764Q96H86 408 aaPredicted RBP18.3■□□□□ 0.52
RPS28-202ENST00000449223 EGLN2Q96KS0 407 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 TSSK3Q96PN8 268 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 SLC25A23Q9BV35 468 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 TOR4AQ9NXH8 423 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 SIDT1Q9NXL6 827 aaKnown RBP18.3■□□□□ 0.52
RPS28-202ENST00000449223 GVINP1Q7Z2Y8 2422 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 A8MU76 341 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 TMPRSS11DO60235 418 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 HNRNPCL1O60812 293 aaKnown RBP18.29■□□□□ 0.52
RPS28-202ENST00000449223 UNC5CO95185 931 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 CBX6O95503 412 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 CTSBP07858 339 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 CDK4P11802 303 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 COX4I1P13073 169 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 CD1EP15812 388 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 MAPK12P53778 367 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 MTTPP55157 894 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 RAB8AP61006 207 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 SNRPNP63162 240 aaKnown RBP18.29■□□□□ 0.52
RPS28-202ENST00000449223 NHLH1Q02575 133 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 ACY1Q03154 408 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 CYLC2Q14093 348 aaPredicted RBP18.29■□□□□ 0.52
RPS28-202ENST00000449223 FAM71E1Q6IPT2 247 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 CCDC121Q6ZUS5 278 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 ASCL5Q7RTU5 278 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 CAMKMTQ7Z624 323 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 C16orf78Q8WTQ4 265 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 MTERF3Q96E29 417 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 NSL1Q96IY1 281 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 C10orf90Q96M02 699 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 SERINC2Q96SA4 455 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 FGF21Q9NSA1 209 aa18.29■□□□□ 0.52
RPS28-202ENST00000449223 ARHGAP10A1A4S6 786 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 ATP5HO75947 161 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 GBAP04062 536 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 SNRPB2P08579 225 aaKnown RBP18.28■□□□□ 0.52
RPS28-202ENST00000449223 POLR2JP52435 117 aaKnown RBP18.28■□□□□ 0.52
RPS28-202ENST00000449223 PDE7AQ13946 482 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 GRM7Q14831 915 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 SLC9A5Q14940 896 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 GPR19Q15760 415 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 NDUFA9Q16795 377 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 COQ5Q5HYK3 327 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 YOD1Q5VVQ6 348 aaPredicted RBP18.28■□□□□ 0.52
RPS28-202ENST00000449223 TLDC1Q6P9B6 456 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 DGLUCYQ7Z3D6 616 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 OR8K5Q8NH50 307 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 N4BP2L2Q92802 583 aaPredicted RBP18.28■□□□□ 0.52
RPS28-202ENST00000449223 SYNDIG1Q9H7V2 258 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 FANCEQ9HB96 536 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 SPTBP11277 2137 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 BBIP1A8MTZ0 92 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 TMEM150CB9EJG8 249 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 GALR3O60755 368 aaPredicted RBP18.28■□□□□ 0.52
RPS28-202ENST00000449223 TBX19O60806 448 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 DKK1O94907 266 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 IL6P05231 212 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 FAM58BPP0C7Q3 252 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 RPL3P39023 403 aaKnown RBP18.28■□□□□ 0.52
RPS28-202ENST00000449223 MNAT1P51948 309 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 NME5P56597 212 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 TAS2R50P59544 299 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 KLC1Q07866 573 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 CDCP2Q5VXM1 449 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 RBM44Q6ZP01 1051 aaKnown RBP18.28■□□□□ 0.52
RPS28-202ENST00000449223 GK5Q6ZS86 529 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 B3GNT8Q7Z7M8 397 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 SNX32Q86XE0 403 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 TMEM132CQ8N3T6 1108 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 KRTCAP2Q8N6L1 136 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 AMER3Q8N944 861 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 RCBTB1Q8NDN9 531 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 OR1L3Q8NH93 324 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 CLHC1Q8NHS4 586 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 TM4SF18Q96CE8 201 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 MVB12AQ96EY5 273 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 PHOX2BQ99453 314 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 ZBTB18Q99592 522 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 NPLQ9BXD5 320 aaPredicted RBP18.28■□□□□ 0.52
RPS28-202ENST00000449223 COPS7BQ9H9Q2 264 aaPredicted RBP18.28■□□□□ 0.52
RPS28-202ENST00000449223 CLK4Q9HAZ1 481 aaKnown RBP18.28■□□□□ 0.52
RPS28-202ENST00000449223 PRDM9Q9NQV7 894 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 TXLNGQ9NUQ3 528 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 LYARQ9NX58 379 aaKnown RBP18.28■□□□□ 0.52
RPS28-202ENST00000449223 EXO1Q9UQ84 846 aaKnown RBP18.28■□□□□ 0.52
RPS28-202ENST00000449223 MRPS2Q9Y399 296 aaKnown RBP18.28■□□□□ 0.52
RPS28-202ENST00000449223 ASB4Q9Y574 426 aa18.28■□□□□ 0.52
RPS28-202ENST00000449223 FAM186AA6NE01 2351 aa18.27■□□□□ 0.52
RPS28-202ENST00000449223 A0A0G2JN53 185 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms