RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 CTNNAL1Q9UBT7 734 aa26.44■■□□□ 1.82
CBX4-202ENST00000448310 PDZD2O15018 2839 aa26.44■■□□□ 1.82
CBX4-202ENST00000448310 TEP1Q99973 2627 aaKnown RBP26.44■■□□□ 1.82
CBX4-202ENST00000448310 NCF1BA6NI72 391 aaPredicted RBP26.43■■□□□ 1.82
CBX4-202ENST00000448310 USP27XA6NNY8 438 aa26.43■■□□□ 1.82
CBX4-202ENST00000448310 NCF1CA8MVU1 366 aaPredicted RBP26.43■■□□□ 1.82
CBX4-202ENST00000448310 NCF1P14598 390 aaPredicted RBP26.43■■□□□ 1.82
CBX4-202ENST00000448310 COX6B1P14854 86 aa26.43■■□□□ 1.82
CBX4-202ENST00000448310 SMSP52788 366 aa26.43■■□□□ 1.82
CBX4-202ENST00000448310 CHERPQ8IWX8 916 aaKnown RBP26.43■■□□□ 1.82
CBX4-202ENST00000448310 GHDCQ8N2G8 530 aa26.43■■□□□ 1.82
CBX4-202ENST00000448310 ARMC2Q8NEN0 867 aa26.43■■□□□ 1.82
CBX4-202ENST00000448310 CCT6BQ92526 530 aa26.43■■□□□ 1.82
CBX4-202ENST00000448310 ANKRD7Q92527 254 aa26.43■■□□□ 1.82
CBX4-202ENST00000448310 PDLIM2Q96JY6 352 aa26.43■■□□□ 1.82
CBX4-202ENST00000448310 TRIM45Q9H8W5 580 aaPredicted RBP26.43■■□□□ 1.82
CBX4-202ENST00000448310 MOCS1Q9NZB8 636 aa26.43■■□□□ 1.82
CBX4-202ENST00000448310 TRBV11-1A0A0K0K1C0 115 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 MYO1DO94832 1006 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 C1GALT1C1LP0DN25 315 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 HNRNPH1P31943 449 aaKnown RBP26.42■■□□□ 1.82
CBX4-202ENST00000448310 TRHRP34981 398 aaPredicted RBP26.42■■□□□ 1.82
CBX4-202ENST00000448310 SLC6A12P48065 614 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 HNMTP50135 292 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 HLCSP50747 726 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 RUNX2Q13950 521 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 SLBPQ14493 270 aaKnown RBP eCLIP26.42■■□□□ 1.82
CBX4-202ENST00000448310 C3P1Q6ZMU1 363 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 SLCO4C1Q6ZQN7 724 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 CAPN12Q6ZSI9 719 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 ADAMTSL2Q86TH1 951 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 APCDD1LQ8NCL9 501 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 TMEM125Q96AQ2 219 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 RHBDF1Q96CC6 855 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 PHF12Q96QT6 1004 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 GPAMQ9HCL2 828 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 PNO1Q9NRX1 252 aaKnown RBP26.42■■□□□ 1.82
CBX4-202ENST00000448310 DCHS2Q6V1P9 2916 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 OTOGQ6ZRI0 2925 aa26.42■■□□□ 1.82
CBX4-202ENST00000448310 C19orf84I3L1E1 186 aa26.41■■□□□ 1.82
CBX4-202ENST00000448310 FCHO1O14526 889 aa26.41■■□□□ 1.82
CBX4-202ENST00000448310 GNAZP19086 355 aa26.41■■□□□ 1.82
CBX4-202ENST00000448310 PPP2R1BP30154 601 aa26.41■■□□□ 1.82
CBX4-202ENST00000448310 PTGER4P35408 488 aa26.41■■□□□ 1.82
CBX4-202ENST00000448310 RFC3P40938 356 aa26.41■■□□□ 1.82
CBX4-202ENST00000448310 STXBP1P61764 594 aaKnown RBP26.41■■□□□ 1.82
CBX4-202ENST00000448310 GDF7Q7Z4P5 450 aa26.41■■□□□ 1.82
CBX4-202ENST00000448310 FGD2Q7Z6J4 655 aa26.41■■□□□ 1.82
CBX4-202ENST00000448310 SPATA6LQ8N4H0 392 aa26.41■■□□□ 1.82
CBX4-202ENST00000448310 B3GNT7Q8NFL0 401 aa26.41■■□□□ 1.82
CBX4-202ENST00000448310 AGAP11Q8TF27 550 aa26.41■■□□□ 1.82
CBX4-202ENST00000448310 GAL3ST3Q96A11 431 aa26.41■■□□□ 1.82
CBX4-202ENST00000448310 FAR2Q96K12 515 aa26.41■■□□□ 1.82
CBX4-202ENST00000448310 RUNDC3BQ96NL0 473 aa26.41■■□□□ 1.82
CBX4-202ENST00000448310 SMYD2Q9NRG4 433 aa26.41■■□□□ 1.82
CBX4-202ENST00000448310 MMACHCQ9Y4U1 282 aa26.41■■□□□ 1.82
CBX4-202ENST00000448310 CSMD2Q7Z408 3487 aa26.4■■□□□ 1.82
CBX4-202ENST00000448310 TGFBR3LH3BV60 316 aa26.4■■□□□ 1.82
CBX4-202ENST00000448310 CDK2AP1O14519 115 aa26.4■■□□□ 1.82
CBX4-202ENST00000448310 ERI3O43414 337 aaKnown RBP26.4■■□□□ 1.82
CBX4-202ENST00000448310 H2AFYO75367 372 aaKnown RBP26.4■■□□□ 1.82
CBX4-202ENST00000448310 ELAVL4P26378 380 aaKnown RBP26.4■■□□□ 1.82
CBX4-202ENST00000448310 PTGER1P34995 402 aa26.4■■□□□ 1.82
CBX4-202ENST00000448310 MEOX1P50221 254 aa26.4■■□□□ 1.82
CBX4-202ENST00000448310 HNRNPFP52597 415 aaKnown RBP26.4■■□□□ 1.82
CBX4-202ENST00000448310 FBXO48Q5FWF7 155 aa26.4■■□□□ 1.82
CBX4-202ENST00000448310 TMIGD1Q6UXZ0 262 aa26.4■■□□□ 1.82
CBX4-202ENST00000448310 TMEM52Q8NDY8 209 aa26.4■■□□□ 1.82
CBX4-202ENST00000448310 MS4A6EQ96DS6 147 aa26.4■■□□□ 1.82
CBX4-202ENST00000448310 VPS39Q96JC1 886 aa26.4■■□□□ 1.82
CBX4-202ENST00000448310 RHOJQ9H4E5 214 aa26.4■■□□□ 1.82
CBX4-202ENST00000448310 ZNF223Q9UK11 482 aaPredicted RBP26.4■■□□□ 1.82
CBX4-202ENST00000448310 FBXW2Q9UKT8 454 aa26.4■■□□□ 1.82
CBX4-202ENST00000448310 EFCAB8A8MWE9 144 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 E7ESA3 106 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 CLDN14O95500 239 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 AGAP20933 346 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 CLCN2P51788 898 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 DOLPP1Q86YN1 238 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 SULF2Q8IWU5 870 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 SCUBE1Q8IWY4 988 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 KLHDC8AQ8IYD2 350 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 ZBED8Q8IZ13 594 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 ARMC10Q8N2F6 343 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 FAM47BQ8NA70 645 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 MTFMTQ96DP5 389 aaKnown RBP26.39■■□□□ 1.82
CBX4-202ENST00000448310 MCMBPQ9BTE3 642 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 CAB39LQ9H9S4 337 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 PRTFDC1Q9NRG1 225 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 SNX24Q9Y343 169 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 ASB1Q9Y576 335 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 CLDN16Q9Y5I7 305 aa26.39■■□□□ 1.82
CBX4-202ENST00000448310 LRIT2A6NDA9 550 aa26.38■■□□□ 1.81
CBX4-202ENST00000448310 RPL21P46778 160 aaKnown RBP26.38■■□□□ 1.81
CBX4-202ENST00000448310 PLA2G16P53816 162 aa26.38■■□□□ 1.81
CBX4-202ENST00000448310 GNG11P61952 73 aa26.38■■□□□ 1.81
CBX4-202ENST00000448310 MRPS25P82663 173 aaKnown RBP26.38■■□□□ 1.81
CBX4-202ENST00000448310 TGFBIQ15582 683 aa26.38■■□□□ 1.81
CBX4-202ENST00000448310 ADNP2Q6IQ32 1131 aa26.38■■□□□ 1.81
CBX4-202ENST00000448310 NCLNQ969V3 563 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms