RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 C5AR2Q9P296 337 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 MRPS33Q9Y291 106 aaKnown RBP15.47■□□□□ 0.07
SF3A1-204ENST00000447376 CCDC88CQ9P219 2028 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 A8MT66 165 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 CHST10O43529 356 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 B3GALT2O43825 422 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 WFS1O76024 890 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 SIX3O95343 332 aaPredicted RBP15.46■□□□□ 0.07
SF3A1-204ENST00000447376 FHP07954 510 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 PLA2G16P53816 162 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 SOX8P57073 446 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 NAA20P61599 178 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 HERVK_113P63132 956 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 EEF1A2Q05639 463 aaKnown RBP15.46■□□□□ 0.07
SF3A1-204ENST00000447376 PCDH1Q08174 1060 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 PARP9Q8IXQ6 854 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 KBTBD2Q8IY47 623 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 C8orf44Q96CB5 159 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 CMTM7Q96FZ5 175 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 PGM2Q96G03 612 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 KCNC2Q96PR1 638 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 TUBB6Q9BUF5 446 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 NPLQ9BXD5 320 aaPredicted RBP15.46■□□□□ 0.07
SF3A1-204ENST00000447376 ERVK-6Q9BXR3 956 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 VN1R1Q9GZP7 353 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 ZNF160Q9HCG1 818 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 ASB1Q9Y576 335 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 SPACA6W5XKT8 324 aa15.46■□□□□ 0.07
SF3A1-204ENST00000447376 LRIT2A6NDA9 550 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 E2F3O00716 465 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 DLX3O60479 287 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 PLIN3O60664 434 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 CLDN9O95484 217 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 PROCP04070 461 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 SBK3P0C264 359 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 RAP1GDS1P52306 607 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 OLR1P78380 273 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 ACTN3Q08043 901 aaPredicted RBP15.45■□□□□ 0.06
SF3A1-204ENST00000447376 ASPHQ12797 758 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 HYAL2Q12891 473 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 DDX39BQ13838 428 aaKnown RBP15.45■□□□□ 0.06
SF3A1-204ENST00000447376 E2F2Q14209 437 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 CASP8Q14790 479 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 NSDHLQ15738 373 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 TMEM35AQ53FP2 167 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 AGAP7PQ5VUJ5 663 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 TTC19Q6DKK2 380 aaPredicted RBP15.45■□□□□ 0.06
SF3A1-204ENST00000447376 ZYG11AQ6WRX3 759 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 LAS2Q8IYD9 372 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 BANPQ8N9N5 519 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 OR5T3Q8NGG3 340 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 MS4A6EQ96DS6 147 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 THOC3Q96J01 351 aaKnown RBP15.45■□□□□ 0.06
SF3A1-204ENST00000447376 AGAP4Q96P64 663 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 NUDT9Q9BW91 350 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 C1QTNF3Q9BXJ4 246 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 RBCK1Q9BYM8 510 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 KLHL31Q9H511 634 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 EPS8L2Q9H6S3 715 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 MLXIPLQ9NP71 852 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 PCTPQ9UKL6 214 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 ZNF490Q9ULM2 529 aaPredicted RBP15.45■□□□□ 0.06
SF3A1-204ENST00000447376 STK38LQ9Y2H1 464 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 PLLPQ9Y342 182 aa15.45■□□□□ 0.06
SF3A1-204ENST00000447376 ATRXP46100 2492 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 IGHV1-45A0A0A0MS14 117 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 SYNDIG1LA6NDD5 238 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 LRRC14BA6NHZ5 514 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 CLDN4O14493 209 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 JRKO75564 520 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 CDC123O75794 336 aaPredicted RBP15.44■□□□□ 0.06
SF3A1-204ENST00000447376 SUPT7LO94864 414 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 OTCP00480 354 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 RPS17P08708 135 aaKnown RBP15.44■□□□□ 0.06
SF3A1-204ENST00000447376 SMIM10L1P0DMW3 83 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 CPA3P15088 417 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 EPORP19235 508 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 CD22P20273 847 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 NR1D1P20393 614 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 IMPDH1P20839 514 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 HNRNPH1P31943 449 aaKnown RBP15.44■□□□□ 0.06
SF3A1-204ENST00000447376 PIK3CBP42338 1070 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 PRKAA2P54646 552 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 MTTPP55157 894 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 ABRAXAS2Q15018 415 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 AP5B1Q2VPB7 878 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 ADPRMQ3LIE5 342 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 TMEM205Q6UW68 189 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 RIPOR1Q6ZS17 1223 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 CPEB2Q7Z5Q1 589 aaKnown RBP15.44■□□□□ 0.06
SF3A1-204ENST00000447376 ZADH2Q8N4Q0 377 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 OR7G3Q8NG95 312 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 SREK1Q8WXA9 508 aaKnown RBP15.44■□□□□ 0.06
SF3A1-204ENST00000447376 SMIM10Q96HG1 83 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 PKNOX2Q96KN3 472 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 SERINC2Q96SA4 455 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 SMAD5Q99717 465 aaKnown RBP15.44■□□□□ 0.06
SF3A1-204ENST00000447376 TBCDQ9BTW9 1192 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 NOL11Q9H8H0 719 aaKnown RBP15.44■□□□□ 0.06
SF3A1-204ENST00000447376 EMCNQ9ULC0 261 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms