RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 RRADP55042 308 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 RPS13P62277 151 aaKnown RBP11.25□□□□□ -0.61
RFC4-208ENST00000447345 PHEXP78562 749 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 CLCQ05315 142 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 SLC18A2Q05940 514 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 PCDH1Q08174 1060 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 TUBB8Q3ZCM7 444 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 CCDC153Q494R4 210 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 LETMD1Q6P1Q0 360 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 KIRREL2Q6UWL6 708 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 LANCL3Q6ZV70 420 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 MILR1Q7Z6M3 343 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 SLC22A9Q8IVM8 553 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 APLFQ8IW19 511 aaPredicted RBP11.25□□□□□ -0.61
RFC4-208ENST00000447345 CA13Q8N1Q1 262 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 L3MBTL4Q8NA19 623 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 ARMC2Q8NEN0 867 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 OR11G2Q8NGC1 345 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 C9orf43Q8TAL5 461 aaPredicted RBP11.25□□□□□ -0.61
RFC4-208ENST00000447345 TSLPQ969D9 159 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 TBC1D20Q96BZ9 403 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 REPS1Q96D71 796 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 SMIM10Q96HG1 83 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 SEC16BQ96JE7 1060 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 IP6K3Q96PC2 410 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 SMC6Q96SB8 1091 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 SORBS1Q9BX66 1292 aaKnown RBP11.25□□□□□ -0.61
RFC4-208ENST00000447345 C1QTNF3Q9BXJ4 246 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 TGIF2Q9GZN2 237 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 ZNF71Q9NQZ8 489 aaPredicted RBP11.25□□□□□ -0.61
RFC4-208ENST00000447345 PCDHGA11Q9Y5H2 935 aa11.25□□□□□ -0.61
RFC4-208ENST00000447345 COL6A6A6NMZ7 2263 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 A0A088AWK7 358 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 IGHV3-20A0A0C4DH32 117 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 FAM227AF5H4B4 570 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 H0YIV9 168 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 MKRN2OSH3BPM6 223 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 PSMD12O00232 456 aaPredicted RBP11.24□□□□□ -0.61
RFC4-208ENST00000447345 RGS16O15492 202 aaPredicted RBP11.24□□□□□ -0.61
RFC4-208ENST00000447345 B3GALT2O43825 422 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 OTCP00480 354 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 FHP07954 510 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 RNH1P13489 461 aaKnown RBP11.24□□□□□ -0.61
RFC4-208ENST00000447345 CPA3P15088 417 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 CREB1P16220 341 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 IMPDH1P20839 514 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 ZNF10P21506 573 aaPredicted RBP11.24□□□□□ -0.61
RFC4-208ENST00000447345 SERPINB1P30740 379 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 SSR2P43308 183 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 PRKAA2P54646 552 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 MTTPP55157 894 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 TGM3Q08188 693 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 ADPRMQ3LIE5 342 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 TCHHL1Q5QJ38 904 aaPredicted RBP11.24□□□□□ -0.61
RFC4-208ENST00000447345 DCAF10Q5QP82 559 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 KHDRBS2Q5VWX1 349 aaKnown RBP11.24□□□□□ -0.61
RFC4-208ENST00000447345 NIPAL1Q6NVV3 410 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 ABHD17CQ6PCB6 329 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 MED25Q71SY5 747 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 UBE3DQ7Z6J8 389 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 AMER2Q8N7J2 671 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 CDYL2Q8N8U2 506 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 TMEM102Q8N9M5 508 aaPredicted RBP11.24□□□□□ -0.61
RFC4-208ENST00000447345 BANPQ8N9N5 519 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 FAM47BQ8NA70 645 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 CLEC1AQ8NC01 280 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 WDR20Q8TBZ3 569 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 METTL21AQ8WXB1 218 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 L3HYPDHQ96EM0 354 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 CMTM7Q96FZ5 175 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 ABHD17AQ96GS6 310 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 FER1L6-AS2Q96M78 137 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 QRFPRQ96P65 431 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 KCNC2Q96PR1 638 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 FAM111AQ96PZ2 611 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 CSF3RQ99062 836 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 HBEGFQ99075 208 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 NTMT1Q9BV86 223 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 GSTO2Q9H4Y5 243 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 ZNF160Q9HCG1 818 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 SLC17A7Q9P2U7 560 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 TP53TG5Q9Y2B4 290 aa11.24□□□□□ -0.61
RFC4-208ENST00000447345 CFAP46Q8IYW2 2715 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 NSG1A0A0A6YYJ2 146 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 CCDC151A5D8V7 595 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 K7EM74 188 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 ETHE1O95571 254 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 COX6A1P12074 109 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 MAOAP21397 527 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 JAK1P23458 1154 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 ITGA3P26006 1051 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 PIK3CBP42338 1070 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 NFATC3Q12968 1075 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 IFT88Q13099 833 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 RUNX2Q13950 521 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 PCLAFQ15004 111 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 ABRAXAS2Q15018 415 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 GGTA1PQ4G0N0 100 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 TMEM35AQ53FP2 167 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 CFAP157Q5JU67 520 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms