RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 SEC16BQ96JE7 1060 aa22.73■■□□□ 1.23
PMS1-214ENST00000446877 SERPINB12Q96P63 405 aa22.73■■□□□ 1.23
PMS1-214ENST00000446877 CCDC77Q9BR77 488 aa22.73■■□□□ 1.23
PMS1-214ENST00000446877 AP1S2P56377 157 aa22.72■■□□□ 1.23
PMS1-214ENST00000446877 NUP107P57740 925 aa22.72■■□□□ 1.23
PMS1-214ENST00000446877 PPIAP62937 165 aaKnown RBP22.72■■□□□ 1.23
PMS1-214ENST00000446877 PLGLB1Q02325 96 aa22.72■■□□□ 1.23
PMS1-214ENST00000446877 KIAA0408Q6ZU52 694 aa22.72■■□□□ 1.23
PMS1-214ENST00000446877 APCDD1LQ8NCL9 501 aa22.72■■□□□ 1.23
PMS1-214ENST00000446877 TRPV3Q8NET8 790 aa22.72■■□□□ 1.23
PMS1-214ENST00000446877 OR10Q1Q8NGQ4 319 aa22.72■■□□□ 1.23
PMS1-214ENST00000446877 GABPB2Q8TAK5 448 aaPredicted RBP22.72■■□□□ 1.23
PMS1-214ENST00000446877 SLC5A11Q8WWX8 675 aa22.72■■□□□ 1.23
PMS1-214ENST00000446877 KCMF1Q9P0J7 381 aa22.72■■□□□ 1.23
PMS1-214ENST00000446877 YARS2Q9Y2Z4 477 aaKnown RBP22.72■■□□□ 1.23
PMS1-214ENST00000446877 MMACHCQ9Y4U1 282 aa22.72■■□□□ 1.23
PMS1-214ENST00000446877 NPIPA2E9PIF3 369 aa22.71■■□□□ 1.23
PMS1-214ENST00000446877 NPIPA3F8WFD2 350 aa22.71■■□□□ 1.23
PMS1-214ENST00000446877 ACOT7O00154 380 aa22.71■■□□□ 1.23
PMS1-214ENST00000446877 TERF2Q15554 542 aa22.71■■□□□ 1.23
PMS1-214ENST00000446877 GXYLT1Q4G148 440 aa22.71■■□□□ 1.23
PMS1-214ENST00000446877 EMC4Q5J8M3 183 aa22.71■■□□□ 1.23
PMS1-214ENST00000446877 HECTD2Q5U5R9 776 aa22.71■■□□□ 1.23
PMS1-214ENST00000446877 RPRMLQ8N4K4 120 aa22.71■■□□□ 1.23
PMS1-214ENST00000446877 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.71■■□□□ 1.23
PMS1-214ENST00000446877 CHDHQ8NE62 594 aaPredicted RBP22.71■■□□□ 1.23
PMS1-214ENST00000446877 MYRIPQ8NFW9 859 aa22.71■■□□□ 1.23
PMS1-214ENST00000446877 VMP1Q96GC9 406 aa22.71■■□□□ 1.23
PMS1-214ENST00000446877 OR4K3Q96R72 315 aa22.71■■□□□ 1.23
PMS1-214ENST00000446877 TMUB1Q9BVT8 246 aa22.71■■□□□ 1.23
PMS1-214ENST00000446877 SLC6A16Q9GZN6 736 aa22.71■■□□□ 1.23
PMS1-214ENST00000446877 PNO1Q9NRX1 252 aaKnown RBP22.71■■□□□ 1.23
PMS1-214ENST00000446877 DYRK1BQ9Y463 629 aa22.71■■□□□ 1.23
PMS1-214ENST00000446877 A8MVJ9 347 aa22.7■■□□□ 1.22
PMS1-214ENST00000446877 ZFAND5O76080 213 aa22.7■■□□□ 1.22
PMS1-214ENST00000446877 IST1P53990 364 aa22.7■■□□□ 1.22
PMS1-214ENST00000446877 IL2P60568 153 aa22.7■■□□□ 1.22
PMS1-214ENST00000446877 TIAL1Q01085 375 aaKnown RBP eCLIP22.7■■□□□ 1.22
PMS1-214ENST00000446877 RBBP5Q15291 538 aaKnown RBP22.7■■□□□ 1.22
PMS1-214ENST00000446877 RGS9BPQ6ZS82 235 aa22.7■■□□□ 1.22
PMS1-214ENST00000446877 GPALPP1Q8IXQ4 340 aa22.7■■□□□ 1.22
PMS1-214ENST00000446877 C2CD4AQ8NCU7 369 aaPredicted RBP22.7■■□□□ 1.22
PMS1-214ENST00000446877 PSD4Q8NDX1 1056 aa22.7■■□□□ 1.22
PMS1-214ENST00000446877 CREB3L4Q8TEY5 395 aa22.7■■□□□ 1.22
PMS1-214ENST00000446877 NEIL2Q969S2 332 aa22.7■■□□□ 1.22
PMS1-214ENST00000446877 AIF1LQ9BQI0 150 aa22.7■■□□□ 1.22
PMS1-214ENST00000446877 RBSNQ9H1K0 784 aa22.7■■□□□ 1.22
PMS1-214ENST00000446877 HPF1Q9NWY4 346 aa22.7■■□□□ 1.22
PMS1-214ENST00000446877 INTS1Q8N201 2190 aaKnown RBP22.69■■□□□ 1.22
PMS1-214ENST00000446877 FAM221AA4D161 298 aa22.69■■□□□ 1.22
PMS1-214ENST00000446877 FOLH1Q04609 750 aa22.69■■□□□ 1.22
PMS1-214ENST00000446877 CA13Q8N1Q1 262 aa22.69■■□□□ 1.22
PMS1-214ENST00000446877 NRGNQ92686 78 aa22.69■■□□□ 1.22
PMS1-214ENST00000446877 FBXL8Q96CD0 374 aa22.69■■□□□ 1.22
PMS1-214ENST00000446877 PDLIM2Q96JY6 352 aa22.69■■□□□ 1.22
PMS1-214ENST00000446877 TSNARE1Q96NA8 513 aa22.69■■□□□ 1.22
PMS1-214ENST00000446877 SPNS1Q9H2V7 528 aa22.69■■□□□ 1.22
PMS1-214ENST00000446877 NAV3Q8IVL0 2385 aa22.69■■□□□ 1.22
PMS1-214ENST00000446877 FAM166BA8MTA8 275 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 BCKDKO14874 412 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 KLK8O60259 260 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 GUCA1CO95843 209 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 SMIM10L1P0DMW3 83 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 ACVR2AP27037 513 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 CXCR5P32302 372 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 CDKN2DP55273 166 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 PDAP1Q13442 181 aaKnown RBP22.68■■□□□ 1.22
PMS1-214ENST00000446877 ZNF585AQ6P3V2 769 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 SLC22A16Q86VW1 577 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 SPC24Q8NBT2 197 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 OR5M9Q8NGP3 310 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 ASB15Q8WXK1 588 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 NCLNQ969V3 563 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 SMIM10Q96HG1 83 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 FAR2Q96K12 515 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 SIGLEC10Q96LC7 697 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 FOXC2Q99958 501 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 KLHL31Q9H511 634 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 PELI2Q9HAT8 420 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 PNPLA3Q9NST1 481 aa22.68■■□□□ 1.22
PMS1-214ENST00000446877 DNAJB12Q9NXW2 375 aaKnown RBP22.68■■□□□ 1.22
PMS1-214ENST00000446877 PPIEQ9UNP9 301 aaKnown RBP22.68■■□□□ 1.22
PMS1-214ENST00000446877 FIGNL2A6NMB9 653 aa22.67■■□□□ 1.22
PMS1-214ENST00000446877 CLDN4O14493 209 aa22.67■■□□□ 1.22
PMS1-214ENST00000446877 SERPINA6P08185 405 aa22.67■■□□□ 1.22
PMS1-214ENST00000446877 MAGEA3P43357 314 aa22.67■■□□□ 1.22
PMS1-214ENST00000446877 PPP2R2AP63151 447 aa22.67■■□□□ 1.22
PMS1-214ENST00000446877 BTN3A2P78410 334 aa22.67■■□□□ 1.22
PMS1-214ENST00000446877 REEP5Q00765 189 aa22.67■■□□□ 1.22
PMS1-214ENST00000446877 TOR1AIP1Q5JTV8 583 aa22.67■■□□□ 1.22
PMS1-214ENST00000446877 IL20RBQ6UXL0 311 aa22.67■■□□□ 1.22
PMS1-214ENST00000446877 GPATCH11Q8N954 259 aa22.67■■□□□ 1.22
PMS1-214ENST00000446877 ANKRD53Q8N9V6 530 aa22.67■■□□□ 1.22
PMS1-214ENST00000446877 OR2M7Q8NG81 312 aa22.67■■□□□ 1.22
PMS1-214ENST00000446877 MAGOHBQ96A72 148 aaKnown RBP22.67■■□□□ 1.22
PMS1-214ENST00000446877 DEPPQ9NTK1 212 aa22.67■■□□□ 1.22
PMS1-214ENST00000446877 OR14I1A6ND48 311 aa22.66■■□□□ 1.22
PMS1-214ENST00000446877 OR2J2O76002 312 aa22.66■■□□□ 1.22
PMS1-214ENST00000446877 ENO2P09104 434 aaPredicted RBP22.66■■□□□ 1.22
PMS1-214ENST00000446877 SAT1P21673 171 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms