RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 AMIGO2Q86SJ2 522 aa8.25□□□□□ -1.09
PTPN3-204ENST00000446349 CLEC1AQ8NC01 280 aa8.25□□□□□ -1.09
PTPN3-204ENST00000446349 ASB15Q8WXK1 588 aa8.25□□□□□ -1.09
PTPN3-204ENST00000446349 KCNN1Q92952 543 aa8.25□□□□□ -1.09
PTPN3-204ENST00000446349 PIWIL1Q96J94 861 aaKnown RBP8.25□□□□□ -1.09
PTPN3-204ENST00000446349 LENG8Q96PV6 779 aaPredicted RBP8.25□□□□□ -1.09
PTPN3-204ENST00000446349 TESMINQ9Y4I5 508 aa8.25□□□□□ -1.09
PTPN3-204ENST00000446349 NOBOXO60393 691 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 PRAMEF2O60811 474 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 TYRP1P17643 537 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 SPINT3P49223 89 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 ARFRP1Q13795 201 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 CATSPEREQ5SY80 951 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 HFE2Q6ZVN8 426 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 ANKRD46Q86W74 232 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 ZNF280BQ86YH2 543 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 SLITRK4Q8IW52 837 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 SLC5A8Q8N695 610 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 TMIEQ8NEW7 156 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 OR56A3Q8NH54 315 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 LMAN1LQ9HAT1 526 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 ACTR3BQ9P1U1 418 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 ZNF222Q9UK12 451 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 OR6C74A6NCV1 312 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 TRIM64A6NGJ6 449 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 EFCAB9A8MZ26 197 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 CSNK1DP48730 415 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 ADARP55265 1226 aaKnown RBP8.24□□□□□ -1.09
PTPN3-204ENST00000446349 VSX2P58304 361 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-204ENST00000446349 IQCHQ86VS3 1027 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 ACVR1CQ8NER5 493 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 SETD6Q8TBK2 473 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 AMDHD1Q96NU7 426 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 CHID1Q9BWS9 393 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 NMUR2Q9GZQ4 415 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 SEC61A2Q9H9S3 476 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 BRF2Q9HAW0 419 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 SIX4Q9UIU6 781 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 U3KQV3 271 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 PLD2O14939 933 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 PDYNP01213 254 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 PROS1P07225 676 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 GLP1RP43220 463 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 RPS13P62277 151 aaKnown RBP8.24□□□□□ -1.09
PTPN3-204ENST00000446349 DSC1Q08554 894 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 ARL6IP1Q15041 203 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 NOXRED1Q6NXP6 359 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 FAM47BQ8NA70 645 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 TLCD1Q96CP7 247 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 DDIT4LQ96D03 193 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 SACM1LQ9NTJ5 587 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 NOP16Q9Y3C1 178 aaKnown RBP8.24□□□□□ -1.09
PTPN3-204ENST00000446349 NHSQ6T4R5 1651 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 IL4RP24394 825 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 CA9Q16790 459 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 GXYLT1Q4G148 440 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 LACTB2Q53H82 288 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-204ENST00000446349 PGM2L1Q6PCE3 622 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 DPY19L3Q6ZPD9 716 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 HTR3DQ70Z44 454 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 ZNF565Q8N9K5 539 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 GATAD2BQ8WXI9 593 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 PYURFQ96I23 114 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 ZNF559Q9BR84 538 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 KLHL21Q9UJP4 597 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 LAMP5Q9UJQ1 280 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 STOML2Q9UJZ1 356 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 NRAPQ86VF7 1730 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 ANKRD28O15084 1053 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 PLOD3O60568 738 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 C8BP07358 591 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 UBL4AP11441 157 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 HOXA9P31269 272 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 PLCXD2Q0VAA5 305 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 SLC39A4Q6P5W5 647 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 ZNF100Q8IYN0 542 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 MRPL43Q8N983 215 aaKnown RBP8.24□□□□□ -1.09
PTPN3-204ENST00000446349 OR8J3Q8NGG0 315 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 TP53INP1Q96A56 240 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 KCTD7Q96MP8 289 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 COPS4Q9BT78 406 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 KCNK13Q9HB14 408 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 MYH7BA7E2Y1 1941 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 CA3P07451 260 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 CFHP08603 1231 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 SLC7A9P82251 487 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 LRRC73Q5JTD7 316 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 TPRG1LQ5T0D9 272 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 ATG9BQ674R7 924 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 ARL14Q8N4G2 192 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 METTL25Q8N6Q8 603 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 OR4F6Q8NGB9 312 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 RAB2BQ8WUD1 216 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 PAK1IP1Q9NWT1 392 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-204ENST00000446349 A8MUA0 341 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 M0R129 80 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 FAM155BO75949 473 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 SCGNO76038 276 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 HLA-EP13747 358 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 HMGCLP35914 325 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms