RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 RMND5AQ9H871 391 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 ROPN1Q9HAT0 212 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 PANK4Q9NVE7 773 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 IL20RAQ9UHF4 553 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 DAPK2Q9UIK4 370 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 MGAT4BQ9UQ53 548 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 ENTPD4Q9Y227 616 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 HECW2Q9P2P5 1572 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 IFT140Q96RY7 1462 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 TRAV18A0A075B6X5 111 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 A0A1W2PRB8 838 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 P2RY10O00398 339 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 CXCL11O14625 94 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 ARPC2O15144 300 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 ZNF432O94892 652 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 CHRNGP07510 517 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 UMODP07911 640 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 CALCBP10092 127 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 EPB41P11171 864 aaKnown RBP4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 PAX1P15863 534 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 DCTP40126 519 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 GLIPR1P48060 266 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 CCZ1BP86790 482 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 CCZ1P86791 482 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 IL24Q13007 206 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 MFAP5Q13361 173 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 PDIA5Q14554 519 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 PHKG1Q16816 387 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 LRRC23Q53EV4 343 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 PHLDA2Q53GA4 152 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 PDSS1Q5T2R2 415 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 NDUFAF5Q5TEU4 345 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 OR4A47Q6IF82 309 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 TTC27Q6P3X3 843 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 C19orf48Q6RUI8 117 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 CES3Q6UWW8 571 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 GDPD4Q6W3E5 623 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 IL17RELQ6ZVW7 336 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 BHLHA9Q7RTU4 235 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 RTN4RL2Q86UN3 420 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 VASH2Q86V25 355 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 CRYBG2Q8N1P7 616 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 SMYD1Q8NB12 490 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 MINDY2Q8NBR6 621 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 KLHDC9Q8NEP7 349 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 OR10Q1Q8NGQ4 319 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 OR2T34Q8NGX1 318 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 FCGR1BQ92637 280 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 TSACCQ96A04 125 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 TUBGCP3Q96CW5 907 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 ZNF583Q96ND8 569 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 PRMT1Q99873 361 aaKnown RBP4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 NTMT1Q9BV86 223 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 PANK2Q9BZ23 570 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 NMNAT2Q9BZQ4 307 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 TRIM6Q9C030 488 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 ZMYND12Q9H0C1 365 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 RIMS4Q9H426 269 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 DCLRE1BQ9H816 532 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 GORASP2Q9H8Y8 452 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 ACTR8Q9H981 624 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 VPS37BQ9H9H4 285 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 HOMER3Q9NSC5 361 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 FARSBQ9NSD9 589 aaKnown RBP4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 ZNF701Q9NV72 531 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 MIS18AQ9NYP9 233 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 ICAM5Q9UMF0 924 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 MFHAS1Q9Y4C4 1052 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 ASB3Q9Y575 518 aa4.04□□□□□ -1.76
HMGB1P48-201ENST00000446155 SMARCA4P51532 1647 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 A0A087WYN8 130 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 FAM172BPA6NC97 362 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 SLC22A2O15244 555 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 GRID2O43424 1007 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 TLX2O43763 284 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 CYTIPO60759 359 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 BAG3O95817 575 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 CRYAAP02489 173 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 SFTPBP07988 381 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 GOT1P17174 413 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 CKMT2P17540 419 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 CBLP22681 906 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 HLA-FP30511 346 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 TIMP3P35625 211 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 TNFSF10P50591 281 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 NR0B1P51843 470 aaKnown RBP4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 THOP1P52888 689 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 METAP1P53582 386 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 HSF2Q03933 536 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 KLC1Q07866 573 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 SNTB2Q13425 540 aaKnown RBP4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 DUOXA1Q1HG43 343 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 ODF4Q2M2E3 257 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 SHROOM1Q2M3G4 852 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 NADK2Q4G0N4 442 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 ZC2HC1CQ53FD0 456 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 TMEM41BQ5BJD5 291 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 CFAP157Q5JU67 520 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 SPDYCQ5MJ68 293 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 C9orf50Q5SZB4 431 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms