RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 LBPP18428 481 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 HIST1H1TP22492 207 aaPredicted RBP16.52■□□□□ 0.23
SGCE-206ENST00000445866 PRPH2P23942 346 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 AVPR1BP47901 424 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 ARFIP1P53367 373 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 KIAA0040Q15053 153 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 LSM12Q3MHD2 195 aaKnown RBP16.52■□□□□ 0.23
SGCE-206ENST00000445866 CCNYL2Q5T2Q4 361 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 RHBDD2Q6NTF9 364 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 DTWD1Q8N5C7 304 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 METTL27Q8N6F8 245 aaPredicted RBP16.52■□□□□ 0.23
SGCE-206ENST00000445866 AMER3Q8N944 861 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 ACOT4Q8N9L9 421 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 SLC38A9Q8NBW4 561 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 MMABQ96EY8 250 aaPredicted RBP16.52■□□□□ 0.23
SGCE-206ENST00000445866 METTL2AQ96IZ6 378 aaKnown RBP16.52■□□□□ 0.23
SGCE-206ENST00000445866 MAELQ96JY0 434 aaKnown RBP16.52■□□□□ 0.23
SGCE-206ENST00000445866 DDA1Q9BW61 102 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 TMEM120AQ9BXJ8 343 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 ULBP3Q9BZM4 244 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 DDX31Q9H8H2 851 aaKnown RBP16.52■□□□□ 0.23
SGCE-206ENST00000445866 TCF7L2Q9NQB0 619 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 PCDHGA8Q9Y5G5 932 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 CNOT1A5YKK6 2376 aaKnown RBP16.52■□□□□ 0.23
SGCE-206ENST00000445866 NPIPB8E9PQR5 432 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 DSCR3O14972 297 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 ZNF28P17035 718 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 RBMS1P29558 406 aaKnown RBP16.51■□□□□ 0.23
SGCE-206ENST00000445866 GCGRP47871 477 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 MTTPP55157 894 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 RPL38P63173 70 aaKnown RBP16.51■□□□□ 0.23
SGCE-206ENST00000445866 SKP1P63208 163 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 GABREP78334 506 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 EMX2Q04743 252 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 SLAMF1Q13291 335 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 NOXRED1Q6NXP6 359 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 CYP20A1Q6UW02 462 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 ZNF793Q6ZN11 406 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 PDSS2Q86YH6 399 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 SLC46A1Q96NT5 459 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 SERINC2Q96SA4 455 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 ADAM29Q9UKF5 820 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 G3BP2Q9UN86 482 aaKnown RBP16.51■□□□□ 0.23
SGCE-206ENST00000445866 EIF3LQ9Y262 564 aaKnown RBP16.51■□□□□ 0.23
SGCE-206ENST00000445866 POLR3HQ9Y535 204 aaPredicted RBP16.51■□□□□ 0.23
SGCE-206ENST00000445866 PCDHGA3Q9Y5H0 932 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 MAU2Q9Y6X3 613 aa16.51■□□□□ 0.23
SGCE-206ENST00000445866 A0A1B0GX78 115 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 GNG14A0A1W2PPG7 69 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 ZNF860A6NHJ4 632 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 C9orf172C9J069 976 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 B3GALT2O43825 422 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 DNAJB6O75190 326 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 ANXA4P09525 319 aaPredicted RBP16.5■□□□□ 0.23
SGCE-206ENST00000445866 TSFMP43897 325 aaKnown RBP16.5■□□□□ 0.23
SGCE-206ENST00000445866 OR1D4P47884 311 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 MAD2L1Q13257 205 aaPredicted RBP16.5■□□□□ 0.23
SGCE-206ENST00000445866 SLC9A5Q14940 896 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 IL23RQ5VWK5 629 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 NIPAL1Q6NVV3 410 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 SPATA19Q7Z5L4 167 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 NUDT13Q86X67 352 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 COL26A1Q96A83 441 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 CCDC28BQ9BUN5 200 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 YIPF2Q9BWQ6 316 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 ZNF717Q9BY31 904 aaPredicted RBP16.5■□□□□ 0.23
SGCE-206ENST00000445866 TMED5Q9Y3A6 229 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 PCDH7O60245 1069 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 SNX3O60493 162 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 CPNE3O75131 537 aaKnown RBP16.5■□□□□ 0.23
SGCE-206ENST00000445866 NSA2O95478 260 aaKnown RBP16.5■□□□□ 0.23
SGCE-206ENST00000445866 PRR35P0CG20 571 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 CERS1P27544 350 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 RAE1P78406 368 aaKnown RBP16.5■□□□□ 0.23
SGCE-206ENST00000445866 CBX1P83916 185 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 ABHD18Q0P651 414 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 RUNX2Q13950 521 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 SMU1Q2TAY7 513 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 PRMT9Q6P2P2 845 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 GALNT18Q6P9A2 607 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 PIGWQ7Z7B1 504 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 MVB12AQ96EY5 273 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 C11orf24Q96F05 449 aaPredicted RBP16.5■□□□□ 0.23
SGCE-206ENST00000445866 C1orf50Q9BV19 199 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 EBPLQ9BY08 206 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 ZNF304Q9HCX3 659 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 SIRT5Q9NXA8 310 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 BAIAP2L1Q9UHR4 511 aa16.5■□□□□ 0.23
SGCE-206ENST00000445866 E9PBE3 544 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 H0YIG0 161 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 MEN1O00255 615 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 UBDO15205 165 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 NVLO15381 856 aaKnown RBP16.49■□□□□ 0.23
SGCE-206ENST00000445866 KLHL41O60662 606 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 RDH16O75452 317 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 STK17BO94768 372 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 FAM107AO95990 144 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 KLK3P07288 261 aaPredicted RBP16.49■□□□□ 0.23
SGCE-206ENST00000445866 FAM58BPP0C7Q3 252 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 BCKDHAP12694 445 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms