RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ERVK-11Q9UQG0 969 aa14.96□□□□□ -0.01
SNX13-204ENST00000444712 CA5BQ9Y2D0 317 aa14.96□□□□□ -0.01
SNX13-204ENST00000444712 BRWD1Q9NSI6 2320 aa14.96□□□□□ -0.01
SNX13-204ENST00000444712 A0A1W2PPC1 479 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 ISM1B1AKI9 464 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 G3V2T6 193 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 H0YAE9 185 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 UPK1AO00322 258 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 PDPK1O15530 556 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 ZNF682O95780 498 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 CHRM5P08912 532 aaPredicted RBP14.95□□□□□ -0.02
SNX13-204ENST00000444712 DRD2P14416 443 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 EFNA1P20827 205 aaPredicted RBP14.95□□□□□ -0.02
SNX13-204ENST00000444712 UQCRC2P22695 453 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 MYF6P23409 242 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 AK4P27144 223 aaPredicted RBP14.95□□□□□ -0.02
SNX13-204ENST00000444712 CHI3L1P36222 383 aaPredicted RBP14.95□□□□□ -0.02
SNX13-204ENST00000444712 CAPGP40121 348 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 SSR2P43308 183 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 ARSFP54793 590 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 TGM3Q08188 693 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 ADRM1Q16186 407 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 NKG7Q16617 165 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 ALG11Q2TAA5 492 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 SLC36A3Q495N2 470 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 ANGPTL8Q6UXH0 198 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 Q6ZSR6 202 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 OR5K1Q8NHB7 308 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 CIDECQ96AQ7 238 aaPredicted RBP14.95□□□□□ -0.02
SNX13-204ENST00000444712 DPH7Q9BTV6 452 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 FAIM2Q9BWQ8 316 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 SORBS1Q9BX66 1292 aaKnown RBP14.95□□□□□ -0.02
SNX13-204ENST00000444712 NLNQ9BYT8 704 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 TMEM38AQ9H6F2 299 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 SLC6A20Q9NP91 592 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 EBF1Q9UH73 591 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 BAG5Q9UL15 447 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 LAMA3Q16787 3333 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 LRIT2A6NDA9 550 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 DLGAP1O14490 977 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 LCMT2O60294 686 aaKnown RBP14.95□□□□□ -0.02
SNX13-204ENST00000444712 ALBP02768 609 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 SERPIND1P05546 499 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 CRATP43155 626 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 MYBPC1Q00872 1141 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 KIR2DS3Q14952 304 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 ADPRMQ3LIE5 342 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 GCNT6Q5T4J0 391 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 TMEM214Q6NUQ4 689 aaKnown RBP14.95□□□□□ -0.02
SNX13-204ENST00000444712 SLC30A9Q6PML9 568 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 HIPK1Q86Z02 1210 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 ZDHHC21Q8IVQ6 265 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 CLEC4FQ8N1N0 589 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 MFSD9Q8NBP5 474 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 TRAPPC9Q96Q05 1148 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 RBM4BQ9BQ04 359 aaKnown RBP14.95□□□□□ -0.02
SNX13-204ENST00000444712 RBM4Q9BWF3 364 aaKnown RBP14.95□□□□□ -0.02
SNX13-204ENST00000444712 TMEM168Q9H0V1 697 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 SRMSQ9H3Y6 488 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 IL1RAPQ9NPH3 570 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 USE1Q9NZ43 259 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 EHD3Q9NZN3 535 aa14.95□□□□□ -0.02
SNX13-204ENST00000444712 IFT80Q9P2H3 777 aaPredicted RBP14.95□□□□□ -0.02
SNX13-204ENST00000444712 REV3LO60673 3130 aa14.94□□□□□ -0.02
SNX13-204ENST00000444712 A0A0A6YYD5 115 aa14.94□□□□□ -0.02
SNX13-204ENST00000444712 RTCAO00442 366 aaKnown RBP14.94□□□□□ -0.02
SNX13-204ENST00000444712 NTRK1P04629 796 aa14.94□□□□□ -0.02
SNX13-204ENST00000444712 PEBP1P30086 187 aaKnown RBP14.94□□□□□ -0.02
SNX13-204ENST00000444712 BCL6P41182 706 aa14.94□□□□□ -0.02
SNX13-204ENST00000444712 STXBP1P61764 594 aaKnown RBP14.94□□□□□ -0.02
SNX13-204ENST00000444712 MPEG1Q2M385 716 aa14.94□□□□□ -0.02
SNX13-204ENST00000444712 TPRG1LQ5T0D9 272 aa14.94□□□□□ -0.02
SNX13-204ENST00000444712 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.94□□□□□ -0.02
SNX13-204ENST00000444712 ZNF425Q6IV72 752 aa14.94□□□□□ -0.02
SNX13-204ENST00000444712 STK32CQ86UX6 486 aa14.94□□□□□ -0.02
SNX13-204ENST00000444712 ZBED6CLQ96FA7 236 aaPredicted RBP14.94□□□□□ -0.02
SNX13-204ENST00000444712 KCNC2Q96PR1 638 aa14.94□□□□□ -0.02
SNX13-204ENST00000444712 GSDMCQ9BYG8 508 aa14.94□□□□□ -0.02
SNX13-204ENST00000444712 NDUFA13Q9P0J0 144 aa14.94□□□□□ -0.02
SNX13-204ENST00000444712 ZNF624Q9P2J8 865 aaPredicted RBP14.94□□□□□ -0.02
SNX13-204ENST00000444712 ANKMY1Q9P2S6 941 aa14.94□□□□□ -0.02
SNX13-204ENST00000444712 KLF15Q9UIH9 416 aa14.94□□□□□ -0.02
SNX13-204ENST00000444712 MYRFQ9Y2G1 1151 aa14.94□□□□□ -0.02
SNX13-204ENST00000444712 RANBP2P49792 3224 aaKnown RBP14.94□□□□□ -0.02
SNX13-204ENST00000444712 FAM221BA6H8Z2 402 aa14.93□□□□□ -0.02
SNX13-204ENST00000444712 A6NCN8 305 aa14.93□□□□□ -0.02
SNX13-204ENST00000444712 OR5K4A6NMS3 321 aa14.93□□□□□ -0.02
SNX13-204ENST00000444712 HAT1O14929 419 aa14.93□□□□□ -0.02
SNX13-204ENST00000444712 SCAMP1O15126 338 aa14.93□□□□□ -0.02
SNX13-204ENST00000444712 NOBOXO60393 691 aa14.93□□□□□ -0.02
SNX13-204ENST00000444712 ZNF217O75362 1048 aa14.93□□□□□ -0.02
SNX13-204ENST00000444712 FKBP9O95302 570 aa14.93□□□□□ -0.02
SNX13-204ENST00000444712 FABP3P05413 133 aa14.93□□□□□ -0.02
SNX13-204ENST00000444712 IGHV4-34P06331 123 aa14.93□□□□□ -0.02
SNX13-204ENST00000444712 CHRNB1P11230 501 aa14.93□□□□□ -0.02
SNX13-204ENST00000444712 CD72P21854 359 aa14.93□□□□□ -0.02
SNX13-204ENST00000444712 SOAT1P35610 550 aa14.93□□□□□ -0.02
SNX13-204ENST00000444712 FRKP42685 505 aaPredicted RBP14.93□□□□□ -0.02
SNX13-204ENST00000444712 PRIM2P49643 509 aa14.93□□□□□ -0.02
SNX13-204ENST00000444712 ARHGDIAP52565 204 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms