RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 SERHLQ9NQF3 203 aa18.19■□□□□ 0.5
PMPCB-204ENST00000444457 ZDHHC3Q9NYG2 299 aa18.19■□□□□ 0.5
PMPCB-204ENST00000444457 LEUTXA8MZ59 168 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 PTPN5P54829 565 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 TEKQ02763 1124 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 USP39Q53GS9 565 aaKnown RBP18.18■□□□□ 0.5
PMPCB-204ENST00000444457 LRRC66Q68CR7 880 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 TMPRSS11AQ6ZMR5 421 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 Q6ZPB1 254 aaPredicted RBP18.18■□□□□ 0.5
PMPCB-204ENST00000444457 TPRG1Q6ZUI0 275 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 PGBD3Q8N328 593 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 TMEM132CQ8N3T6 1108 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 STX19Q8N4C7 294 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 REPS1Q96D71 796 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 FRMD6Q96NE9 622 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 ZNF556Q9HAH1 456 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 MEN1O00255 615 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 C9P02748 559 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 HSMCR30P0CW71 290 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 CTSOP43234 321 aaPredicted RBP18.18■□□□□ 0.5
PMPCB-204ENST00000444457 RPIAP49247 311 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 STK19P49842 368 aaPredicted RBP18.18■□□□□ 0.5
PMPCB-204ENST00000444457 CREB3L2Q70SY1 520 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 TMCO2Q7Z6W1 182 aaPredicted RBP18.18■□□□□ 0.5
PMPCB-204ENST00000444457 YIPF7Q8N8F6 280 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 MRPS31Q92665 395 aaKnown RBP18.18■□□□□ 0.5
PMPCB-204ENST00000444457 COQ8BQ96D53 544 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 ASIC4Q96FT7 647 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 TRAF4Q9BUZ4 470 aaPredicted RBP18.18■□□□□ 0.5
PMPCB-204ENST00000444457 NUP50Q9UKX7 468 aa18.18■□□□□ 0.5
PMPCB-204ENST00000444457 OR5K3A6NET4 321 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 EFCAB10A6NFE3 127 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 RGS5O15539 181 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 CLDN9O95484 217 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 SRCP12931 536 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 EPORP19235 508 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 CBLP22681 906 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 AZGP1P25311 298 aaKnown RBP18.17■□□□□ 0.5
PMPCB-204ENST00000444457 PTPN6P29350 595 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 SNRPD1P62314 119 aaKnown RBP18.17■□□□□ 0.5
PMPCB-204ENST00000444457 CYP4F2P78329 520 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 B4GALNT1Q00973 533 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 TP53BP2Q13625 1128 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 TAB1Q15750 504 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 TRIM60Q495X7 471 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 ZNF551Q7Z340 670 aaPredicted RBP18.17■□□□□ 0.5
PMPCB-204ENST00000444457 FAM181AQ8N9Y4 354 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 CLHC1Q8NHS4 586 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 MTFMTQ96DP5 389 aaKnown RBP18.17■□□□□ 0.5
PMPCB-204ENST00000444457 SCRN2Q96FV2 425 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 KCNC2Q96PR1 638 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 COPS8Q99627 209 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 ACPTQ9BZG2 426 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 ABCG8Q9H221 673 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 SLC32A1Q9H598 525 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 RNF121Q9H920 327 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 ARL15Q9NXU5 204 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 MYOFQ9NZM1 2061 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 DPM1O60762 260 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 C1QBP02746 253 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 BCKDHAP12694 445 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 UQCRC1P31930 480 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 CCR7P32248 378 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 NUDT6P53370 316 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 ST3GAL4Q11206 333 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 CPSF6Q16630 551 aaKnown RBP eCLIP18.17■□□□□ 0.51e-8■■■■■ 32.5
PMPCB-204ENST00000444457 ATP13A5Q4VNC0 1218 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 OR4F3Q6IEY1 312 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 USP45Q70EL2 814 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 KRT73Q86Y46 540 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 ECHDC3Q96DC8 303 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 BARHL1Q9BZE3 327 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 UCK2Q9BZX2 261 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 RAD18Q9NS91 495 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 MAT2BQ9NZL9 334 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 KLHL42Q9P2K6 505 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 RPS6KA6Q9UK32 745 aa18.17■□□□□ 0.5
PMPCB-204ENST00000444457 LINC00854A0A1B0GVQ3 168 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 SEC14L5O43304 696 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 BNIP3LO60238 219 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 TMCC2O75069 709 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 CYP2A6P11509 494 aaPredicted RBP18.16■□□□□ 0.5
PMPCB-204ENST00000444457 ZNF30P17039 623 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 CTRB1P17538 263 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 LHCGRP22888 699 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 PSPHP78330 225 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 SLC7A9P82251 487 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 TSTQ16762 297 aaKnown RBP18.16■□□□□ 0.5
PMPCB-204ENST00000444457 TOR2AQ5JU69 321 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 CDKL4Q5MAI5 379 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 CTRB2Q6GPI1 263 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 VTCN1Q7Z7D3 282 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 DDX53Q86TM3 631 aaKnown RBP18.16■□□□□ 0.5
PMPCB-204ENST00000444457 LAX1Q8IWV1 398 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 FBXL6Q8N531 539 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 C9orf43Q8TAL5 461 aaPredicted RBP18.16■□□□□ 0.5
PMPCB-204ENST00000444457 ZNF689Q96CS4 500 aaPredicted RBP18.16■□□□□ 0.5
PMPCB-204ENST00000444457 BBS2Q9BXC9 721 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 PRRG3Q9BZD7 231 aa18.16■□□□□ 0.5
PMPCB-204ENST00000444457 C11orf54Q9H0W9 315 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms