RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 SLC6A16Q9GZN6 736 aa9.05□□□□□ -0.96
SMPD4P1-203ENST00000443839 AICDAQ9GZX7 198 aa9.05□□□□□ -0.96
SMPD4P1-203ENST00000443839 COPS7BQ9H9Q2 264 aaPredicted RBP9.05□□□□□ -0.96
SMPD4P1-203ENST00000443839 C1GALT1Q9NS00 363 aa9.05□□□□□ -0.96
SMPD4P1-203ENST00000443839 ATAD3AQ9NVI7 634 aa9.05□□□□□ -0.96
SMPD4P1-203ENST00000443839 FAM120CQ9NX05 1096 aaKnown RBP9.05□□□□□ -0.96
SMPD4P1-203ENST00000443839 PADI4Q9UM07 663 aa9.05□□□□□ -0.96
SMPD4P1-203ENST00000443839 LOC105369274A0A096LPK9 316 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 C15orf38-AP3S2A0A0A6YYH1 394 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 LOC102723532A0A0G2JNH3 316 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 URADA6NGE7 173 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 H0YGG7 62 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 ARHGAP33O14559 1287 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 RFXANKO14593 260 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 DUX1O43812 170 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 ENTPD5O75356 428 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 SORBS2O94875 1100 aaKnown RBP9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 SYPP08247 313 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 RPSAP08865 295 aaKnown RBP9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 LAMP1P11279 417 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 PIM1P11309 404 aaPredicted RBP9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 HIST1H1TP22492 207 aaPredicted RBP9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 ME2P23368 584 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 SLC6A2P23975 617 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 GPR3P46089 330 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 ARFIP1P53367 373 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 GFERP55789 205 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 ARF3P61204 181 aaPredicted RBP9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 PHC1P78364 1004 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 MC1RQ01726 317 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 HEPACAMQ14CZ8 416 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 FAM71E1Q6IPT2 247 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 SLC23A3Q6PIS1 610 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 DLEU7Q6UYE1 221 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 MSANTD1Q6ZTZ1 278 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 RNF44Q7L0R7 432 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 ARPINQ7Z6K5 226 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 KIAA2013Q8IYS2 634 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 OR4N4Q8N0Y3 316 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 VPS37AQ8NEZ2 397 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 OR2I1PQ8NGU4 316 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 OR4C6Q8NH72 309 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 ZCCHC10Q8TBK6 192 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 NT5CQ8TCD5 201 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 WDR60Q8WVS4 1066 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 GAL3ST3Q96A11 431 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 TRAPPC9Q96Q05 1148 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 TBCDQ9BTW9 1192 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 GTPBP2Q9BX10 602 aaKnown RBP9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 TRIM8Q9BZR9 551 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 EPB41L1Q9H4G0 881 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 SOHLH2Q9NX45 425 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 TMEM181Q9P2C4 612 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 KLHL3Q9UH77 587 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 POMPQ9Y244 141 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 WBP11Q9Y2W2 641 aaKnown RBP9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 IGHV1OR21-1A0A087WYE8 117 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 A0A0A6YYD5 115 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 TLCD2A6NGC4 264 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 C4orf51C9J302 202 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 TRIM38O00635 465 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 P2RX6O15547 441 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 KIF1CO43896 1103 aaKnown RBP9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 TMPRSS11DO60235 418 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 KLHL18O94889 574 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 B3GALT4O96024 378 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 FURINP09958 794 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 ZNF888P0CJ79 500 aaPredicted RBP9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 MSX2P35548 267 aaPredicted RBP9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 MPLP40238 635 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 TSFMP43897 325 aaKnown RBP9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 GSTM5P46439 218 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 ALDH9A1P49189 494 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 VSX2P58304 361 aaPredicted RBP9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 GPLD1P80108 840 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 FOXK1P85037 733 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 KLC1Q07866 573 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 SLAMF1Q13291 335 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 SLC9A5Q14940 896 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 NR0B2Q15466 257 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 CCDC6Q16204 474 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 DEFB110Q30KQ9 67 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 RABL3Q5HYI8 236 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 ZC3H12BQ5HYM0 836 aaKnown RBP9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 WASHC2DQ5SRD0 308 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 NANOGP8Q6NSW7 305 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 ZNF793Q6ZN11 406 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 KANSL1Q7Z3B3 1105 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 CAMKMTQ7Z624 323 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 CSNK1A1LQ8N752 337 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 ACOT4Q8N9L9 421 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 FAM156AQ8NDB6 213 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 DNAJB8Q8NHS0 232 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 STMN2Q93045 179 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 TM4SF19Q96DZ7 209 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 MTERF3Q96E29 417 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 TCTN2Q96GX1 697 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 ZNF570Q96NI8 536 aa9.04□□□□□ -0.96
SMPD4P1-203ENST00000443839 PANX1Q96RD7 426 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms