RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 FOXS1O43638 330 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 GSTA1P08263 222 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 COL6A2P12110 1019 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 IL1RNP18510 177 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 CCT5P48643 541 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 CCR8P51685 355 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 CSNK1G2P78368 415 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 EEF1A2Q05639 463 aaKnown RBP8.29□□□□□ -1.08
USP6NL-203ENST00000443016 CDC16Q13042 620 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 MRPL49Q13405 166 aaKnown RBP8.29□□□□□ -1.08
USP6NL-203ENST00000443016 TNFAIP8L3Q5GJ75 292 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 ATG9BQ674R7 924 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 Q6ZS92 163 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 C4orf33Q8N1A6 199 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 NKAPQ8N5F7 415 aaKnown RBP8.29□□□□□ -1.08
USP6NL-203ENST00000443016 TBC1D19Q8N5T2 526 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 AMER3Q8N944 861 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 ZNF454Q8N9F8 522 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 PPP4R1Q8TF05 950 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 THAP11Q96EK4 314 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 OLFM1Q99784 485 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 ANKHQ9HCJ1 492 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 RIC8BQ9NVN3 520 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 MKS1Q9NXB0 559 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 NKIRAS1Q9NYS0 192 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 PTGFRNQ9P2B2 879 aa8.29□□□□□ -1.08
USP6NL-203ENST00000443016 HMX2A2RU54 273 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 PHGDHO43175 533 aaKnown RBP8.28□□□□□ -1.08
USP6NL-203ENST00000443016 OR1F1O43749 312 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 NSA2O95478 260 aaKnown RBP8.28□□□□□ -1.08
USP6NL-203ENST00000443016 TSPAN12O95859 305 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 C2P06681 752 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 C8orf89P0DMQ9 161 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 NPPBP16860 134 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 ZNF37AP17032 561 aaPredicted RBP8.28□□□□□ -1.08
USP6NL-203ENST00000443016 HPDP32754 393 aaPredicted RBP8.28□□□□□ -1.08
USP6NL-203ENST00000443016 ARG2P78540 354 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 MEF2AQ02078 507 aaPredicted RBP8.28□□□□□ -1.08
USP6NL-203ENST00000443016 CSHL1Q14406 222 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 TLR1Q15399 786 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 FAM83EQ2M2I3 478 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 GFOD2Q3B7J2 385 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 FAM180BQ6P0A1 224 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 LCTLQ6UWM7 567 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 VN1R4Q7Z5H5 301 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 ASPGQ86U10 573 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 CUZD1Q86UP6 607 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 IPCEF1Q8WWN9 437 aaPredicted RBP8.28□□□□□ -1.08
USP6NL-203ENST00000443016 EGFL8Q99944 293 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 HCN3Q9P1Z3 774 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 DCDC2Q9UHG0 476 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 MID2Q9UJV3 735 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 SH2B3Q9UQQ2 575 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 MRPS2Q9Y399 296 aaKnown RBP8.28□□□□□ -1.08
USP6NL-203ENST00000443016 CSAG2Q9Y5P2 127 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 MAGED1Q9Y5V3 778 aaPredicted RBP8.28□□□□□ -1.08
USP6NL-203ENST00000443016 DOCK10Q96BY6 2186 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 DOPEY1Q5JWR5 2465 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 POLEQ07864 2286 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 UNC79Q9P2D8 2635 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 A0A1W2PPM1 405 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 BLACEA4D250 179 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 H0YIG0 161 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 GOLGA8RI6L899 631 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 SGK494L7N484 410 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 PCDH17O14917 1159 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 NDUFS4O43181 175 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 JRKO75564 520 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 WFS1O76024 890 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 BMP10O95393 424 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 ENO2P09104 434 aaPredicted RBP8.28□□□□□ -1.08
USP6NL-203ENST00000443016 COX6A1P12074 109 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 ICAM2P13598 275 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 BCL6P41182 706 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 XCR1P46094 333 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 SLC18A2Q05940 514 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 SRSF1Q07955 248 aaKnown RBP eCLIP8.28□□□□□ -1.08
USP6NL-203ENST00000443016 Q0VFX4 171 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 C1orf122Q6ZSJ8 110 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 FRA10AC1Q70Z53 315 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 PRSS41Q7RTY9 318 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 EXOC3L1Q86VI1 746 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 SIRT6Q8N6T7 355 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 KCT2Q8NC54 265 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 OR51Q1Q8NH59 317 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 THAP3Q8WTV1 239 aaPredicted RBP8.28□□□□□ -1.08
USP6NL-203ENST00000443016 NINJ1Q92982 152 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 SGPP1Q9BX95 441 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 CNOT10Q9H9A5 744 aaKnown RBP8.28□□□□□ -1.08
USP6NL-203ENST00000443016 KCNK9Q9NPC2 374 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 SHANK1Q9Y566 2161 aa8.28□□□□□ -1.08
USP6NL-203ENST00000443016 IGHV1-45A0A0A0MS14 117 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 TM9SF1O15321 606 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 LCMT2O60294 686 aaKnown RBP8.27□□□□□ -1.09
USP6NL-203ENST00000443016 ZWINTO95229 277 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 SERPINA7P05543 415 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 LTA4HP09960 611 aaKnown RBP8.27□□□□□ -1.09
USP6NL-203ENST00000443016 PRR35P0CG20 571 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 SLC35E2BP0CK96 405 aa8.27□□□□□ -1.09
USP6NL-203ENST00000443016 ATP6V0D1P61421 351 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms