RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 ABOP16442 354 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 ZNF37AP17032 561 aaPredicted RBP7.29□□□□□ -1.24
CD44-211ENST00000442151 IVDP26440 423 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 SPRP35270 261 aaPredicted RBP7.29□□□□□ -1.24
CD44-211ENST00000442151 CD96P40200 585 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 HLCSP50747 726 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 TDGF1P3P51864 188 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 BTN3A2P78410 334 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 TIAL1Q01085 375 aaKnown RBP eCLIP7.29□□□□□ -1.24
CD44-211ENST00000442151 SERTAD2Q14140 314 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 MAPKAPK3Q16644 382 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 TOR1AIP1Q5JTV8 583 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 GRTP1Q5TC63 336 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 C1QL3Q5VWW1 255 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 RGS9BPQ6ZS82 235 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 MRGPRGQ86SM5 289 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 TMPRSS11BQ86T26 416 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 ZC3HC1Q86WB0 502 aaKnown RBP7.29□□□□□ -1.24
CD44-211ENST00000442151 GPSM1Q86YR5 675 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 SPPL2CQ8IUH8 684 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 AGGF1Q8N302 714 aaeCLIP7.29□□□□□ -1.24
CD44-211ENST00000442151 TMEM156Q8N614 296 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 FBXO36Q8NEA4 188 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 ELP5Q8TE02 316 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 CCT6BQ92526 530 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 DAZLQ92904 295 aaKnown RBP7.29□□□□□ -1.24
CD44-211ENST00000442151 NEIL2Q969S2 332 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 VMP1Q96GC9 406 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 SMIM10Q96HG1 83 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 CAPZA3Q96KX2 299 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 SERINC2Q96SA4 455 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 EFCAB11Q9BUY7 163 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 PHACTR1Q9C0D0 580 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 DERL2Q9GZP9 239 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 RAB17Q9H0T7 212 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 TRIM45Q9H8W5 580 aaPredicted RBP7.29□□□□□ -1.24
CD44-211ENST00000442151 TIMMDC1Q9NPL8 285 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 PRTFDC1Q9NRG1 225 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 LANCL2Q9NS86 450 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 DNAJC11Q9NVH1 559 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 WHRNQ9P202 907 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 UTP11Q9Y3A2 253 aaKnown RBP7.29□□□□□ -1.24
CD44-211ENST00000442151 HEATR5BQ9P2D3 2071 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 PCSK5Q92824 1860 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 SPTAN1Q13813 2472 aaKnown RBP7.29□□□□□ -1.24
CD44-211ENST00000442151 LRRK2Q5S007 2527 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 IGHV3-20A0A0C4DH32 117 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 ASPDHA6ND91 283 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 E7ESA3 106 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 FAM227AF5H4B4 570 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 ASNA1O43681 348 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 SLC19A2O60779 497 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 TSPAN12O95859 305 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 COX6B1P14854 86 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 STMN1P16949 149 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 CRABP2P29373 138 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 TRHRP34981 398 aaPredicted RBP7.29□□□□□ -1.24
CD44-211ENST00000442151 RAB38P57729 211 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 KCNK10P57789 538 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 MLF1P58340 268 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 PHEXP78562 749 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 NAB1Q13506 487 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 TMEM35AQ53FP2 167 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 CATSPEREQ5SY80 951 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 SBSNQ6UWP8 590 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 MBOAT1Q6ZNC8 495 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 Q6ZPB1 254 aaPredicted RBP7.29□□□□□ -1.24
CD44-211ENST00000442151 LANCL3Q6ZV70 420 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 CHSY3Q70JA7 882 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 TICAM1Q8IUC6 712 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 ANKMY2Q8IV38 441 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 TMEM151BQ8IW70 566 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 CNPY4Q8N129 248 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 MDS2Q8NDY4 140 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 B3GNT7Q8NFL0 401 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 OR5L2Q8NGL0 311 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 STAG3L4Q8TBR4 150 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 PHF10Q8WUB8 498 aaKnown RBP7.29□□□□□ -1.24
CD44-211ENST00000442151 PTCD3Q96EY7 689 aaKnown RBP7.29□□□□□ -1.24
CD44-211ENST00000442151 TAAR6Q96RI8 345 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 RHBGQ9H310 441 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 NMRAL1Q9HBL8 299 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 MS4A12Q9NXJ0 267 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 WWOXQ9NZC7 414 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 COQ3Q9NZJ6 369 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 YARS2Q9Y2Z4 477 aaKnown RBP7.29□□□□□ -1.24
CD44-211ENST00000442151 CLCA3PQ9Y6N3 262 aa7.29□□□□□ -1.24
CD44-211ENST00000442151 MDC1Q14676 2089 aaKnown RBP7.28□□□□□ -1.24
CD44-211ENST00000442151 RP1L1Q8IWN7 2480 aaPredicted RBP7.28□□□□□ -1.24
CD44-211ENST00000442151 TCRBV16S1A1N1A0A5B0 115 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 SYCE1LA8MT33 242 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 ZG16O60844 167 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 CTNSO60931 367 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 STK16O75716 305 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 STATHP02808 62 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 CELA2AP08217 269 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 COX7A2P14406 83 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 TNNI3P19429 210 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 PPP2R1BP30154 601 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 GGT5P36269 586 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms