RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 AMER2Q8N7J2 671 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 OR7G3Q8NG95 312 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 ZNF473Q8WTR7 871 aaKnown RBP22.26■■□□□ 1.15
VARS-217ENST00000440048 TSLPQ969D9 159 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 PHF21BQ96EK2 531 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 F2RL3Q96RI0 385 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 MRPL57Q9BQC6 102 aaKnown RBP22.26■■□□□ 1.15
VARS-217ENST00000440048 CCDC77Q9BR77 488 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 TUBB6Q9BUF5 446 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 MRPL46Q9H2W6 279 aaKnown RBP22.26■■□□□ 1.15
VARS-217ENST00000440048 IQANK1A0A1B0GTG1 560 aa22.25■■□□□ 1.15
VARS-217ENST00000440048 MAGEB17A8MXT2 336 aa22.25■■□□□ 1.15
VARS-217ENST00000440048 FAM227AF5H4B4 570 aa22.25■■□□□ 1.15
VARS-217ENST00000440048 SMIM24O75264 130 aa22.25■■□□□ 1.15
VARS-217ENST00000440048 SEC24DO94855 1032 aaPredicted RBP22.25■■□□□ 1.15
VARS-217ENST00000440048 PCNAP12004 261 aa22.25■■□□□ 1.15
VARS-217ENST00000440048 EEF1DP29692 281 aaKnown RBP22.25■■□□□ 1.15
VARS-217ENST00000440048 RUNX2Q13950 521 aa22.25■■□□□ 1.15
VARS-217ENST00000440048 NSDHLQ15738 373 aa22.25■■□□□ 1.15
VARS-217ENST00000440048 TRIM40Q6P9F5 258 aa22.25■■□□□ 1.15
VARS-217ENST00000440048 ABHD17CQ6PCB6 329 aa22.25■■□□□ 1.15
VARS-217ENST00000440048 UBLCP1Q8WVY7 318 aaPredicted RBP22.25■■□□□ 1.15
VARS-217ENST00000440048 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.25■■□□□ 1.15
VARS-217ENST00000440048 TM9SF4Q92544 642 aa22.25■■□□□ 1.15
VARS-217ENST00000440048 WDR77Q9BQA1 342 aaPredicted RBP22.25■■□□□ 1.15
VARS-217ENST00000440048 NPLQ9BXD5 320 aaPredicted RBP22.25■■□□□ 1.15
VARS-217ENST00000440048 MS4A8Q9BY19 250 aa22.25■■□□□ 1.15
VARS-217ENST00000440048 IPPKQ9H8X2 491 aa22.25■■□□□ 1.15
VARS-217ENST00000440048 ACTR8Q9H981 624 aa22.25■■□□□ 1.15
VARS-217ENST00000440048 A0A088AWK7 358 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 STX16-NPEPL1H3BU86 382 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 PSMD12O00232 456 aaPredicted RBP22.24■■□□□ 1.15
VARS-217ENST00000440048 STX16O14662 325 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 SORBS2O94875 1100 aaKnown RBP22.24■■□□□ 1.15
VARS-217ENST00000440048 SHBGP04278 402 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 SBK3P0C264 359 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 ZNF10P21506 573 aaPredicted RBP22.24■■□□□ 1.15
VARS-217ENST00000440048 PIK3CGP48736 1102 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 MLLT10P55197 1068 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 LIPJQ5W064 366 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 IGFL2Q6UWQ7 119 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 RIPOR1Q6ZS17 1223 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 MYLK4Q86YV6 388 aaPredicted RBP22.24■■□□□ 1.15
VARS-217ENST00000440048 TMEM151AQ8N4L1 468 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 ZADH2Q8N4Q0 377 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 Q8NA96 180 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 BRIX1Q8TDN6 353 aaKnown RBP22.24■■□□□ 1.15
VARS-217ENST00000440048 PSMF1Q92530 271 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 PNPLA2Q96AD5 504 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 PRM3Q9NNZ6 103 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 LUZP4Q9P127 313 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 TBK1Q9UHD2 729 aa22.24■■□□□ 1.15
VARS-217ENST00000440048 LRRK2Q5S007 2527 aa22.23■■□□□ 1.15
VARS-217ENST00000440048 TTLL8A6PVC2 850 aa22.23■■□□□ 1.15
VARS-217ENST00000440048 B3GALT2O43825 422 aa22.23■■□□□ 1.15
VARS-217ENST00000440048 UGDHO60701 494 aa22.23■■□□□ 1.15
VARS-217ENST00000440048 ZIC2O95409 532 aaPredicted RBP22.23■■□□□ 1.15
VARS-217ENST00000440048 ICAM2P13598 275 aa22.23■■□□□ 1.15
VARS-217ENST00000440048 SERPINB1P30740 379 aa22.23■■□□□ 1.15
VARS-217ENST00000440048 BTG2P78543 158 aa22.23■■□□□ 1.15
VARS-217ENST00000440048 TGM3Q08188 693 aa22.23■■□□□ 1.15
VARS-217ENST00000440048 SFT2D3Q587I9 215 aa22.23■■□□□ 1.15
VARS-217ENST00000440048 ISLR2Q6UXK2 745 aa22.23■■□□□ 1.15
VARS-217ENST00000440048 QSOX2Q6ZRP7 698 aa22.23■■□□□ 1.15
VARS-217ENST00000440048 UBE3DQ7Z6J8 389 aa22.23■■□□□ 1.15
VARS-217ENST00000440048 MZB1Q8WU39 189 aa22.23■■□□□ 1.15
VARS-217ENST00000440048 PTCHD1Q96NR3 888 aa22.23■■□□□ 1.15
VARS-217ENST00000440048 SERINC2Q96SA4 455 aa22.23■■□□□ 1.15
VARS-217ENST00000440048 PRDM7Q9NQW5 492 aa22.23■■□□□ 1.15
VARS-217ENST00000440048 PTPN13Q12923 2485 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 PRMT3O60678 531 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 SH3BGRLO75368 114 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 TGFB1P01137 390 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 ITGAMP11215 1152 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 CERS1P27544 350 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 MTTPP55157 894 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 DDX39BQ13838 428 aaKnown RBP22.22■■□□□ 1.15
VARS-217ENST00000440048 IGFBP7Q16270 282 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 PLEKHN1Q494U1 663 aaPredicted RBP22.22■■□□□ 1.15
VARS-217ENST00000440048 CRB2Q5IJ48 1285 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 PLAG1Q6DJT9 500 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 LINC00696Q6ZRV3 163 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 RNF175Q8N4F7 328 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 SIRT6Q8N6T7 355 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 HUS1BQ8NHY5 278 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 NOL11Q9H8H0 719 aaKnown RBP22.22■■□□□ 1.15
VARS-217ENST00000440048 COPS7BQ9H9Q2 264 aaPredicted RBP22.22■■□□□ 1.15
VARS-217ENST00000440048 SLAMF7Q9NQ25 335 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 TMEM216Q9P0N5 145 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 PTGFRNQ9P2B2 879 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 ADGRE2Q9UHX3 823 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 PCTPQ9UKL6 214 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 B3GNT3Q9Y2A9 372 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 RNF11Q9Y3C5 154 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 PCDHGA11Q9Y5H2 935 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 CSAG2Q9Y5P2 127 aa22.22■■□□□ 1.15
VARS-217ENST00000440048 GOLGA8RI6L899 631 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 OR7A17O14581 309 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 SOX11P35716 441 aa22.21■■□□□ 1.15
VARS-217ENST00000440048 RAB38P57729 211 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms