RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 SEMA3GQ9NS98 782 aa18.4■□□□□ 0.54
SEMA3B-206ENST00000439487 OXSMQ9NWU1 459 aa18.4■□□□□ 0.54
SEMA3B-206ENST00000439487 SENP1Q9P0U3 644 aa18.4■□□□□ 0.54
SEMA3B-206ENST00000439487 MID2Q9UJV3 735 aa18.4■□□□□ 0.54
SEMA3B-206ENST00000439487 MKL2Q9ULH7 1088 aa18.4■□□□□ 0.54
SEMA3B-206ENST00000439487 OR2W5A6NFC9 320 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 MAGEB17A8MXT2 336 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 IDSB3KWA1 339 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 SAP18O00422 153 aaKnown RBP18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 IGHEP01854 428 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 HEXBP07686 556 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 EFNA3P52797 238 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 NAGLUP54802 743 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 DNAJB13P59910 316 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 PHEXP78562 749 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 RUNX2Q13950 521 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 PCLAFQ15004 111 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 GGTA1PQ4G0N0 100 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 TNFAIP8L3Q5GJ75 292 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 DEPDC1Q5TB30 811 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 MFSD4BQ5TF39 518 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 KHDRBS2Q5VWX1 349 aaKnown RBP18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 CPZQ66K79 652 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 FAAH2Q6GMR7 532 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 CHSY3Q70JA7 882 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 CROCCP2Q86T23 111 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 CA13Q8N1Q1 262 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 UBL7Q96S82 380 aaPredicted RBP18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 PRDM7Q9NQW5 492 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 P4HTMQ9NXG6 502 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 HS3ST3B1Q9Y662 390 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 CROCCQ5TZA2 2017 aa18.39■□□□□ 0.53
SEMA3B-206ENST00000439487 CNTRLQ7Z7A1 2325 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 RTCAO00442 366 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 PEX12O00623 359 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 SOCS6O14544 535 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 TYROBPO43914 113 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 MLYCDO95822 493 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 TGM3Q08188 693 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 IFT88Q13099 833 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 CASP8Q14790 479 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 MINDY4Q4G0A6 757 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 TMEM35AQ53FP2 167 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 SGO1Q5FBB7 561 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 LIPMQ5VYY2 423 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 FRG2Q64ET8 278 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 GPRIN3Q6ZVF9 776 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 MYRIPQ8NFW9 859 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 MAGEB10Q96LZ2 347 aaPredicted RBP18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 IP6K3Q96PC2 410 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 FRG2BQ96QU4 278 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 ZNF382Q96SR6 550 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 TRIM55Q9BYV6 548 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 CLK4Q9HAZ1 481 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 TRPS1Q9UHF7 1281 aa18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 TLN1Q9Y490 2541 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-206ENST00000439487 A0A088AWK7 358 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 MASP2O00187 686 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 FOXE1O00358 373 aaPredicted RBP18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 B3GALT2O43825 422 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 CDC123O75794 336 aaPredicted RBP18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 DNAJB5O75953 348 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 ETHE1O95571 254 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 FAM87AP0C7U9 286 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 ZNF10P21506 573 aaPredicted RBP18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 PTX3P26022 381 aaPredicted RBP18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 CERS1P27544 350 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 ALDH3A1P30838 453 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 POLE2P56282 527 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 LCP2Q13094 533 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 CFAP157Q5JU67 520 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 KIRREL2Q6UWL6 708 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 ZNF793Q6ZN11 406 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 CDYL2Q8N8U2 506 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 EXD3Q8N9H8 876 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 SRFBP1Q8NEF9 429 aaKnown RBP18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 TBC1D20Q96BZ9 403 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 C8orf44Q96CB5 159 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 PGM2Q96G03 612 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 BBC3Q96PG8 261 aaPredicted RBP18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 KCNC2Q96PR1 638 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 SERINC2Q96SA4 455 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 TBCDQ9BTW9 1192 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 MECRQ9BV79 373 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 SORBS1Q9BX66 1292 aaKnown RBP18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 NPLQ9BXD5 320 aaPredicted RBP18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 VN1R1Q9GZP7 353 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 ING2Q9H160 280 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 ELOVL6Q9H5J4 265 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 COPS7BQ9H9Q2 264 aaPredicted RBP18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 LANCL2Q9NS86 450 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 FARSBQ9NSD9 589 aaKnown RBP18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 STK38LQ9Y2H1 464 aa18.37■□□□□ 0.53
SEMA3B-206ENST00000439487 FAM227AF5H4B4 570 aa18.36■□□□□ 0.53
SEMA3B-206ENST00000439487 AGPSO00116 658 aa18.36■□□□□ 0.53
SEMA3B-206ENST00000439487 UBFD1O14562 309 aaKnown RBP18.36■□□□□ 0.53
SEMA3B-206ENST00000439487 B4GALT2O60909 372 aa18.36■□□□□ 0.53
SEMA3B-206ENST00000439487 ALOX12BO75342 701 aa18.36■□□□□ 0.53
SEMA3B-206ENST00000439487 FHP07954 510 aa18.36■□□□□ 0.53
SEMA3B-206ENST00000439487 RNH1P13489 461 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms