RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 RNF112Q9ULX5 631 aa8.72□□□□□ -1.01
AC011228.1-201ENST00000439027 RUVBL1Q9Y265 456 aaKnown RBP8.72□□□□□ -1.01
AC011228.1-201ENST00000439027 POLQO75417 2590 aa8.71□□□□□ -1.01
AC011228.1-201ENST00000439027 A0A0A6YYC8 382 aaPredicted RBP8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 IDSB3KWA1 339 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 SUPT3HB4E1H0 165 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 G3V2L1 256 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 I3L1I5 382 aaPredicted RBP8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 MYO1CO00159 1063 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 KERAO60938 352 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 SUPT3HO75486 399 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 F10P00742 488 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 STATHP02808 62 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 SERPINA7P05543 415 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 C8GP07360 202 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 SBK3P0C264 359 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 PRR35P0CG20 571 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 DHRS4L1P0CG22 281 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 MYL2P10916 166 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 NEFHP12036 1026 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 EDN3P14138 238 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 TAC1P20366 129 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 HSD17B2P37059 387 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 SERPINB4P48594 390 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 PNLIPRP1P54315 467 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 GUCY1A3Q02108 690 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 PRDX1Q06830 199 aaKnown RBP8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 ARHGAP19Q14CB8 494 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 HKDC1Q2TB90 917 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 ICE2Q659A1 982 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 ATG9BQ674R7 924 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 TTC19Q6DKK2 380 aaPredicted RBP8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 ZYG11AQ6WRX3 759 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 NEK10Q6ZWH5 1172 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 FRA10AC1Q70Z53 315 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 UBE2R2Q712K3 238 aaPredicted RBP8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 ADAMTSL2Q86TH1 951 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 PLD3Q8IV08 490 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 NUDCD3Q8IVD9 361 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 SIRT6Q8N6T7 355 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 BCORP1Q8N888 145 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 PPFIBP2Q8ND30 876 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 RHEBL1Q8TAI7 183 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 RDH11Q8TC12 318 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 BRIX1Q8TDN6 353 aaKnown RBP8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 ASB11Q8WXH4 323 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 CDK15Q96Q40 435 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 ATOH8Q96SQ7 321 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 MECRQ9BV79 373 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 OLAHQ9NV23 265 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 C14orf105Q9NVL8 296 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 COPG2Q9UBF2 871 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 MID2Q9UJV3 735 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 PKDREJQ9NTG1 2253 aa8.71□□□□□ -1.02
AC011228.1-201ENST00000439027 NUP210LQ5VU65 1888 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 IGLV3-12A0A075B6K2 115 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 TRAV17A0A0B4J275 112 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 IGKV1-8A0A0C4DH67 115 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 CCDC189A1A4V9 331 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 NCF1BA6NI72 391 aaPredicted RBP8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 SYCE1LA8MT33 242 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 NCF1CA8MVU1 366 aaPredicted RBP8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 GFYI3L273 518 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 UBXN8O00124 270 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 E2F3O00716 465 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 TXNDC9O14530 226 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 SLC16A5O15375 505 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 BIRC5O15392 142 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 DLX3O60479 287 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 SMIM24O75264 130 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 PSIP1O75475 530 aaKnown RBP8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 JRKO75564 520 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 BMP10O95393 424 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 BPGMP07738 259 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 CELA2AP08217 269 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 COX6A1P12074 109 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 GFAPP14136 432 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 NCF1P14598 390 aaPredicted RBP8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 ATP5F1P24539 256 aaPredicted RBP8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 ALDH3A1P30838 453 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 MDH1P40925 334 aaKnown RBP8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 ABATP80404 500 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 MAT1AQ00266 395 aaKnown RBP8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 PCLAFQ15004 111 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 NDUFA9Q16795 377 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 PHKG1Q16816 387 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 PPP1R3AQ16821 1122 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 SYT16Q17RD7 645 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 MFSD4BQ5TF39 518 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 GARNL3Q5VVW2 1013 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 SBSNQ6UWP8 590 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 FJX1Q86VR8 437 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 C10orf107Q8IVU9 208 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 MCOLN3Q8TDD5 553 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 ZNF480Q8WV37 535 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 PHF21BQ96EK2 531 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 MVB12AQ96EY5 273 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 TRIM54Q9BYV2 358 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 DRC3Q9H069 523 aa8.7□□□□□ -1.02
AC011228.1-201ENST00000439027 PARVBQ9HBI1 364 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms