RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 GPR173Q9NS66 373 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 ABCB8Q9NUT2 735 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 COMMD8Q9NX08 183 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 TEX10Q9NXF1 929 aaPredicted RBP3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 DCAF16Q9NXF7 216 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 UTP6Q9NYH9 597 aaKnown RBP3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 SUN2Q9UH99 717 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 NOCTQ9UK39 431 aaKnown RBP3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 NSG2Q9Y328 171 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 PCDHGA1Q9Y5H4 931 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 KIF26BQ2KJY2 2108 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 C13orf42A0A1B0GVH6 325 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 ANTXRLA6NF34 631 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 TMEM110-MUSTN1A8MSY1 372 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 BOLA2-SMG1P6H3BVE0 249 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 RNF103O00237 685 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 TFECO14948 347 aaPredicted RBP3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 CTDSPLO15194 276 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 ST8SIA3O43173 380 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 FMO6PO60774 539 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 KERAO60938 352 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 PNPP00491 289 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 GH1P01241 217 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 NEFHP12036 1026 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 GOT1P17174 413 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 ITIH1P19827 911 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 UGT1A4P22310 534 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 CTNNA2P26232 953 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 GIFP27352 417 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 MAPK3P27361 379 aaPredicted RBP3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 ST8SIA6P61647 398 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 RPP38P78345 283 aaKnown RBP3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 AKAP17AQ02040 695 aaKnown RBP3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 DHODHQ02127 395 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 TMED1Q13445 227 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 SLMAPQ14BN4 828 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 NECTIN1Q15223 517 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 C14orf177Q52M58 125 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 LRRC38Q5VT99 294 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 OR4C11Q6IEV9 310 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 LCLAT1Q6UWP7 414 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 GBP6Q6ZN66 633 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 Q6ZRP5 223 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 STXBP4Q6ZWJ1 553 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 MCM10Q7L590 875 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 OTUD6AQ7L8S5 288 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 OTOAQ7RTW8 1153 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 TRMT11Q7Z4G4 463 aaKnown RBP3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 ZNF444Q8N0Y2 327 aaPredicted RBP3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 METTL4Q8N3J2 472 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 OR10G7Q8NGN6 311 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 SNRNP40Q96DI7 357 aaKnown RBP3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 ZNF599Q96NL3 588 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 AGAP4Q96P64 663 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 HNRNPABQ99729 332 aaKnown RBP3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 PIGQQ9BRB3 760 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 OVOL2Q9BRP0 275 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 TRIM15Q9C019 465 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 TRIM6Q9C030 488 aaPredicted RBP3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 MMADHCQ9H3L0 296 aaPredicted RBP3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 DPEP2Q9H4A9 486 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 VIPAS39Q9H9C1 493 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 DNAJC17Q9NVM6 304 aaKnown RBP3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 TMOD3Q9NYL9 352 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 CGNQ9P2M7 1197 aaKnown RBP3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 TBK1Q9UHD2 729 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 POMT2Q9UKY4 750 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 GPR132Q9UNW8 380 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 SATB2Q9UPW6 733 aa3.22□□□□□ -1.89
LSM1P1-201ENST00000438629 A0A0J9YWU9 116 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 A0A0U1RQK1 487 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF320A2RRD8 509 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 LRRD1A4D1F6 860 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 FAM149AA5PLN7 773 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 NPIPB9F8W1W9 429 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 H3BMM5 538 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 M0R296 226 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF263O14978 683 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 ZBTB14O43829 449 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 GAS8-AS1O95177 125 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 MT-ND2P03891 347 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 ZSCAN5DPP0CG00 497 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF883P0CG24 379 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 PDHA2P29803 388 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 GPR183P32249 361 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 SLC1A3P43003 542 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 OR3A1P47881 315 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 HILS1P60008 231 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 STX1BP61266 288 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 ASIC1P78348 528 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 SLC34A1Q06495 639 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 MTF1Q14872 753 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF674Q2M3X9 581 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 MOGAT2Q3SYC2 334 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 IQCCQ4KMZ1 466 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF770Q6IQ21 691 aaPredicted RBP3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 RAB12Q6IQ22 244 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 SLC27A4Q6P1M0 643 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 RFPL4BQ6ZWI9 263 aa3.21□□□□□ -1.9
LSM1P1-201ENST00000438629 SLC22A15Q8IZD6 547 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms