RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 SNF8Q96H20 258 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 FAR2Q96K12 515 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 TSNARE1Q96NA8 513 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 PTCHD1Q96NR3 888 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 AIF1LQ9BQI0 150 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 RHBGQ9H310 441 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 ADAMTS6Q9UKP5 1117 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 CORO1CQ9ULV4 474 aaPredicted RBP7.29□□□□□ -1.24
VPS50-204ENST00000438395 MED16Q9Y2X0 877 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 KLF13Q9Y2Y9 288 aaPredicted RBP7.29□□□□□ -1.24
VPS50-204ENST00000438395 OTOGQ6ZRI0 2925 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 NBPF19A0A087WUL8 3843 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 CROCCQ5TZA2 2017 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 A0A088AWK7 358 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 OR2W5A6NFC9 320 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 CHST10O43529 356 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 GALR3O60755 368 aaPredicted RBP7.28□□□□□ -1.24
VPS50-204ENST00000438395 SASH3O75995 380 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 CLDN14O95500 239 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 SP1P08047 785 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 ZNF888P0CJ79 500 aaPredicted RBP7.28□□□□□ -1.24
VPS50-204ENST00000438395 NPPBP16860 134 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 AGAP20933 346 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 ZNF10P21506 573 aaPredicted RBP7.28□□□□□ -1.24
VPS50-204ENST00000438395 SAT1P21673 171 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 SSTR2P30874 369 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 HPDP32754 393 aaPredicted RBP7.28□□□□□ -1.24
VPS50-204ENST00000438395 CDKN2DP55273 166 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 SLC26A5P58743 744 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 STXBP1P61764 594 aaKnown RBP7.28□□□□□ -1.24
VPS50-204ENST00000438395 OLR1P78380 273 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 PLAURQ03405 335 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 RBBP5Q15291 538 aaKnown RBP7.28□□□□□ -1.24
VPS50-204ENST00000438395 CYP1B1Q16678 543 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 SPINK14Q6IE38 97 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 SLC25A25Q6KCM7 469 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 FAM45BPQ6NSW5 357 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 H3F3CQ6NXT2 135 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 CAPN12Q6ZSI9 719 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.28□□□□□ -1.24
VPS50-204ENST00000438395 STRA8Q7Z7C7 330 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 TMPRSS11BQ86T26 416 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 SPPL2CQ8IUH8 684 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 CEP97Q8IW35 865 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 LRRC8AQ8IWT6 810 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 RASGEF1CQ8N431 466 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 NAT8LQ8N9F0 302 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 POGLUT1Q8NBL1 392 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 ZNF740Q8NDX6 193 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 MDS2Q8NDY4 140 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 PLPP5Q8NEB5 264 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 TRPV3Q8NET8 790 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 ABHD11Q8NFV4 315 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 OR5T3Q8NGG3 340 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 FAM45AQ8TCE6 357 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 AGAP11Q8TF27 550 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 CCT6BQ92526 530 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 FBXL8Q96CD0 374 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 MTFMTQ96DP5 389 aaKnown RBP7.28□□□□□ -1.24
VPS50-204ENST00000438395 TM4SF19Q96DZ7 209 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 CERS2Q96G23 380 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 MS4A14Q96JA4 679 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 VPS39Q96JC1 886 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 SIGLEC10Q96LC7 697 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 FRMD6Q96NE9 622 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 SIGLEC12Q96PQ1 595 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 EGFL8Q99944 293 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 HES7Q9BYE0 225 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 DEFB126Q9BYW3 111 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 CDCP1Q9H5V8 836 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 CLK4Q9HAZ1 481 aaKnown RBP7.28□□□□□ -1.24
VPS50-204ENST00000438395 LANCL2Q9NS86 450 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 COQ3Q9NZJ6 369 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 ZFP69BQ9UJL9 534 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 PPT2Q9UMR5 302 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 SH2B3Q9UQQ2 575 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 KCNE2Q9Y6J6 123 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 MYO7BQ6PIF6 2116 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 TACC2O95359 2948 aa7.28□□□□□ -1.24
VPS50-204ENST00000438395 PCNX1Q96RV3 2341 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 TRBV11-1A0A0K0K1C0 115 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 ASPDHA6ND91 283 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 SAGE2PA6NJ88 616 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 USP27XA6NNY8 438 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 CLDN4O14493 209 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 FANCGO15287 622 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 ZSCAN12O43309 604 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 ASNA1O43681 348 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 LCMT2O60294 686 aaKnown RBP7.27□□□□□ -1.25
VPS50-204ENST00000438395 NME2P1O60361 137 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 H2AFYO75367 372 aaKnown RBP7.27□□□□□ -1.25
VPS50-204ENST00000438395 MAOAP21397 527 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 NME2P22392 152 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 TPP2P29144 1249 aaPredicted RBP7.27□□□□□ -1.25
VPS50-204ENST00000438395 AHRP35869 848 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 GATA4P43694 442 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 ST13P50502 369 aaKnown RBP7.27□□□□□ -1.25
VPS50-204ENST00000438395 HLCSP50747 726 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 EFNA3P52797 238 aa7.27□□□□□ -1.25
VPS50-204ENST00000438395 SLC12A2P55011 1212 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms