RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 TNFRSF10CO14798 259 aa24.53■■□□□ 1.52
CPNE1-216ENST00000437340 NDUFS4O43181 175 aa24.53■■□□□ 1.52
CPNE1-216ENST00000437340 SNAP29O95721 258 aa24.53■■□□□ 1.52
CPNE1-216ENST00000437340 GNAO1P09471 354 aa24.53■■□□□ 1.52
CPNE1-216ENST00000437340 GRK3P35626 688 aa24.53■■□□□ 1.52
CPNE1-216ENST00000437340 MVDP53602 400 aa24.53■■□□□ 1.52
CPNE1-216ENST00000437340 RBBP4Q09028 425 aa24.53■■□□□ 1.52
CPNE1-216ENST00000437340 CCINQ13939 588 aa24.53■■□□□ 1.52
CPNE1-216ENST00000437340 ADCK2Q7Z695 626 aa24.53■■□□□ 1.52
CPNE1-216ENST00000437340 PATL1Q86TB9 770 aaKnown RBP24.53■■□□□ 1.52
CPNE1-216ENST00000437340 ZDHHC21Q8IVQ6 265 aa24.53■■□□□ 1.52
CPNE1-216ENST00000437340 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.53■■□□□ 1.52
CPNE1-216ENST00000437340 FAM3CQ92520 227 aa24.53■■□□□ 1.52
CPNE1-216ENST00000437340 TM4SF18Q96CE8 201 aa24.53■■□□□ 1.52
CPNE1-216ENST00000437340 RBM4BQ9BQ04 359 aaKnown RBP24.53■■□□□ 1.52
CPNE1-216ENST00000437340 RBM4Q9BWF3 364 aaKnown RBP24.53■■□□□ 1.52
CPNE1-216ENST00000437340 OSBPL10Q9BXB5 764 aa24.53■■□□□ 1.52
CPNE1-216ENST00000437340 SLC6A16Q9GZN6 736 aa24.53■■□□□ 1.52
CPNE1-216ENST00000437340 CLK4Q9HAZ1 481 aaKnown RBP24.53■■□□□ 1.52
CPNE1-216ENST00000437340 MRPS30Q9NP92 439 aaKnown RBP24.53■■□□□ 1.52
CPNE1-216ENST00000437340 TAAR2Q9P1P5 351 aa24.53■■□□□ 1.52
CPNE1-216ENST00000437340 PCOLCE2Q9UKZ9 415 aa24.53■■□□□ 1.52
CPNE1-216ENST00000437340 FAF1Q9UNN5 650 aaPredicted RBP24.53■■□□□ 1.52
CPNE1-216ENST00000437340 PGM3O95394 542 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 ALBP02768 609 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 NTRK1P04629 796 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 THRBP10828 461 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 TRA2BP62995 288 aaKnown RBP24.52■■□□□ 1.52
CPNE1-216ENST00000437340 TMEM35AQ53FP2 167 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 DDX59Q5T1V6 619 aaKnown RBP eCLIP24.52■■□□□ 1.522e-6■■□□□ 13.7
CPNE1-216ENST00000437340 HIPK1Q86Z02 1210 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 NAGSQ8N159 534 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 MAFAQ8NHW3 353 aaPredicted RBP24.52■■□□□ 1.52
CPNE1-216ENST00000437340 PDXPQ96GD0 296 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 BMFQ96LC9 184 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 SARGQ9BW04 601 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 SCHIP1Q9P0W5 487 aaPredicted RBP24.52■■□□□ 1.52
CPNE1-216ENST00000437340 DUSP12Q9UNI6 340 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 TCRBV21S2A2A0A5A6 115 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 LCMT2O60294 686 aaKnown RBP24.52■■□□□ 1.52
CPNE1-216ENST00000437340 PPP2R2BQ00005 443 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 KCTD21Q4G0X4 260 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 ISLR2Q6UXK2 745 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 ADGRF3Q8IZF5 1079 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 TSPAN14Q8NG11 270 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 CREB3L4Q8TEY5 395 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 CAAP1Q9H8G2 361 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 DDX31Q9H8H2 851 aaKnown RBP24.52■■□□□ 1.52
CPNE1-216ENST00000437340 CD93Q9NPY3 652 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 GPATCH2Q9NW75 528 aa24.52■■□□□ 1.52
CPNE1-216ENST00000437340 RTCAO00442 366 aaKnown RBP24.51■■□□□ 1.51
CPNE1-216ENST00000437340 TNFRSF21O75509 655 aa24.51■■□□□ 1.51
CPNE1-216ENST00000437340 KRT75O95678 551 aa24.51■■□□□ 1.51
CPNE1-216ENST00000437340 NUDT7P0C024 238 aa24.51■■□□□ 1.51
CPNE1-216ENST00000437340 DCTP40126 519 aa24.51■■□□□ 1.51
CPNE1-216ENST00000437340 YPEL5P62699 121 aa24.51■■□□□ 1.51
CPNE1-216ENST00000437340 SPIDRQ14159 915 aa24.51■■□□□ 1.51
CPNE1-216ENST00000437340 C16orf72Q14CZ0 275 aa24.51■■□□□ 1.51
CPNE1-216ENST00000437340 TRIM40Q6P9F5 258 aa24.51■■□□□ 1.51
CPNE1-216ENST00000437340 TBC1D19Q8N5T2 526 aa24.51■■□□□ 1.51
CPNE1-216ENST00000437340 ASPSCR1Q9BZE9 553 aa24.51■■□□□ 1.51
CPNE1-216ENST00000437340 TMEM38AQ9H6F2 299 aa24.51■■□□□ 1.51
CPNE1-216ENST00000437340 LHX9Q9NQ69 397 aa24.51■■□□□ 1.51
CPNE1-216ENST00000437340 OR6C2Q9NZP2 312 aa24.51■■□□□ 1.51
CPNE1-216ENST00000437340 TBC1D29Q9UFV1 150 aa24.51■■□□□ 1.51
CPNE1-216ENST00000437340 TOR1BO14657 336 aa24.5■■□□□ 1.51
CPNE1-216ENST00000437340 GABRG2P18507 467 aa24.5■■□□□ 1.51
CPNE1-216ENST00000437340 SHMT2P34897 504 aa24.5■■□□□ 1.51
CPNE1-216ENST00000437340 CRATP43155 626 aa24.5■■□□□ 1.51
CPNE1-216ENST00000437340 ARFIP1P53367 373 aa24.5■■□□□ 1.51
CPNE1-216ENST00000437340 NR1H2P55055 460 aa24.5■■□□□ 1.51
CPNE1-216ENST00000437340 PRSS53Q2L4Q9 553 aa24.5■■□□□ 1.51
CPNE1-216ENST00000437340 PIWIL3Q7Z3Z3 882 aaKnown RBP24.5■■□□□ 1.51
CPNE1-216ENST00000437340 PJA1Q8NG27 643 aa24.5■■□□□ 1.51
CPNE1-216ENST00000437340 OR2L3Q8NG85 312 aa24.5■■□□□ 1.51
CPNE1-216ENST00000437340 ZFP28Q8NHY6 868 aa24.5■■□□□ 1.51
CPNE1-216ENST00000437340 TRIM4Q9C037 500 aa24.5■■□□□ 1.51
CPNE1-216ENST00000437340 TM9SF3Q9HD45 589 aa24.5■■□□□ 1.51
CPNE1-216ENST00000437340 IFT80Q9P2H3 777 aaPredicted RBP24.5■■□□□ 1.51
CPNE1-216ENST00000437340 MAGED1Q9Y5V3 778 aaPredicted RBP24.5■■□□□ 1.51
CPNE1-216ENST00000437340 MYOCOSA0A1B0GUC4 107 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 E2F6O75461 281 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 FABP3P05413 133 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 UQCRC2P22695 453 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 AKT2P31751 481 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 AHRP35869 848 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 IST1P53990 364 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 TUBA4AP68366 448 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 ELOAQ14241 798 aaKnown RBP24.49■■□□□ 1.51
CPNE1-216ENST00000437340 ZIC1Q15915 447 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 GCNT6Q5T4J0 391 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 OR4C11Q6IEV9 310 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 TTC33Q6PID6 262 aaPredicted RBP24.49■■□□□ 1.51
CPNE1-216ENST00000437340 ZNF852Q6ZMS4 543 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 UBE3DQ7Z6J8 389 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 FBXL20Q96IG2 436 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 HSH2DQ96JZ2 352 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 ADPRHL2Q9NX46 363 aa24.49■■□□□ 1.51
CPNE1-216ENST00000437340 NDRG2Q9UN36 371 aaKnown RBP24.49■■□□□ 1.51
CPNE1-216ENST00000437340 HS3ST3A1Q9Y663 406 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms