RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 RGPD3A6NKT7 1758 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P31-201ENST00000437242 RGPD4Q7Z3J3 1758 aa2.48□□□□□ -2.01
HMGB1P31-201ENST00000437242 KNDC1Q76NI1 1749 aa2.48□□□□□ -2.01
HMGB1P31-201ENST00000437242 LMO7Q8WWI1 1683 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 AKAP12Q02952 1782 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 TRAV34A0A0B4J273 112 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 A0A1W2PPK0 400 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 FAM170AA1A519 330 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 ARHGEF37A1IGU5 675 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 C2orf81A6NN90 581 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 PSMA7O14818 248 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 IFIT3O14879 490 aaKnown RBP2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 LUC7L3O95232 432 aaKnown RBP2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 ACSL3O95573 720 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 HPP00738 406 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 RPN1P04843 607 aaKnown RBP2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 SMIM18P0DKX4 95 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 GP1BBP13224 206 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 GLULP15104 373 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 CDH3P22223 829 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 KRT83P78385 493 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 MZT1Q08AG7 82 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 FCHO2Q0JRZ9 810 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 VEZF1Q14119 521 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 CAPRIN1Q14444 709 aaKnown RBP2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 CDO1Q16878 200 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 XKR3Q5GH77 459 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 SPDYCQ5MJ68 293 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 SHEQ5VZ18 495 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 ARMC3Q5W041 872 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 FAM91A1Q658Y4 838 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 FRRS1Q6ZNA5 592 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 MSANTD1Q6ZTZ1 278 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 SPATA21Q7Z572 469 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 SPATA19Q7Z5L4 167 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 CEACAM19Q7Z692 300 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 GLRX5Q86SX6 157 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 MMD2Q8IY49 270 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 ZBED8Q8IZ13 594 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 OR11H4Q8NGC9 324 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 OR4K1Q8NGD4 311 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 OR13C3Q8NGS6 347 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 THOC1Q96FV9 657 aaKnown RBP2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 FAM71F1Q96KD3 344 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 C10orf90Q96M02 699 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 FAM20AQ96MK3 541 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 SPATA33Q96N06 139 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 PSMB7Q99436 277 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 LGMNQ99538 433 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 URM1Q9BTM9 101 aaKnown RBP2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 FAM129AQ9BZQ8 928 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 XAB2Q9HCS7 855 aaKnown RBP2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 DNAJC4Q9NNZ3 241 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 GSN-AS1Q9NRJ2 163 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 B4GALT7Q9UBV7 327 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 GTF3C4Q9UKN8 822 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 POMT2Q9UKY4 750 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 STUB1Q9UNE7 303 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 WDR83OSQ9Y284 106 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 NAIPQ13075 1403 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 WDR90Q96KV7 1748 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 PARP4Q9UKK3 1724 aaKnown RBP2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 PIK3R4Q99570 1358 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 TOPAZ1Q8N9V7 1692 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 QRICH2Q9H0J4 1663 aa2.47□□□□□ -2.01
HMGB1P31-201ENST00000437242 RPRD2Q5VT52 1461 aaKnown RBP2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 TNS3Q68CZ2 1445 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 LOC105371242A0A075B767 164 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 A0A087WUV0 522 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 CASTOR2A6NHX0 329 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 ENO4A6NNW6 628 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 C2CD4DB7Z1M9 353 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 H0Y626 953 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 EPHB6O15197 1021 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 STX6O43752 255 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 SNX3O60493 162 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 RPS6KA5O75582 802 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 ATP6AP2O75787 350 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 KRT33AO76009 404 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 C9P02748 559 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 VTNP04004 478 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 GBAP04062 536 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 VIMP08670 466 aaKnown RBP2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 TSPY4P0CV99 314 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 TSPY10P0CW01 314 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 SLC2A2P11168 524 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 PDGFRAP16234 1089 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 EPORP19235 508 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 RGS7P49802 495 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 VAMP7P51809 220 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 MFAP3P55082 362 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 UBASH3AP57075 661 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 CD300CQ08708 224 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 ILF2Q12905 390 aaKnown RBP2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 PHLDA2Q53GA4 152 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 SLC35D3Q5M8T2 416 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 CES4AQ5XG92 561 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 CAVIN1Q6NZI2 390 aaKnown RBP2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 PHLDB2Q86SQ0 1253 aa2.46□□□□□ -2.02
HMGB1P31-201ENST00000437242 CATSPERDQ86XM0 798 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms