RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 TXNDC8Q6A555 127 aa14.33□□□□□ -0.11
TOP3B-206ENST00000436282 DNAJB7Q7Z6W7 309 aaPredicted RBP14.33□□□□□ -0.11
TOP3B-206ENST00000436282 NLRP8Q86W28 1048 aa14.33□□□□□ -0.11
TOP3B-206ENST00000436282 SLC44A2Q8IWA5 706 aaPredicted RBP14.33□□□□□ -0.11
TOP3B-206ENST00000436282 JPH3Q8WXH2 748 aaPredicted RBP14.33□□□□□ -0.11
TOP3B-206ENST00000436282 MMP28Q9H239 520 aa14.33□□□□□ -0.11
TOP3B-206ENST00000436282 RANGRFQ9HD47 186 aaPredicted RBP14.33□□□□□ -0.11
TOP3B-206ENST00000436282 ABCB8Q9NUT2 735 aa14.33□□□□□ -0.11
TOP3B-206ENST00000436282 WDR70Q9NW82 654 aa14.33□□□□□ -0.11
TOP3B-206ENST00000436282 CLN6Q9NWW5 311 aa14.33□□□□□ -0.11
TOP3B-206ENST00000436282 ENOPH1Q9UHY7 261 aa14.33□□□□□ -0.11
TOP3B-206ENST00000436282 SNX7Q9UNH6 387 aa14.33□□□□□ -0.11
TOP3B-206ENST00000436282 BNIP3LO60238 219 aa14.33□□□□□ -0.12
TOP3B-206ENST00000436282 OPN1SWP03999 348 aa14.33□□□□□ -0.12
TOP3B-206ENST00000436282 PIPP12273 146 aaPredicted RBP14.33□□□□□ -0.12
TOP3B-206ENST00000436282 CHMP24386 653 aa14.33□□□□□ -0.12
TOP3B-206ENST00000436282 RHAGQ02094 409 aa14.33□□□□□ -0.12
TOP3B-206ENST00000436282 PTGES3Q15185 160 aaKnown RBP14.33□□□□□ -0.12
TOP3B-206ENST00000436282 CHRNA6Q15825 494 aa14.33□□□□□ -0.12
TOP3B-206ENST00000436282 TRIM60Q495X7 471 aa14.33□□□□□ -0.12
TOP3B-206ENST00000436282 BBS7Q8IWZ6 715 aa14.33□□□□□ -0.12
TOP3B-206ENST00000436282 CRIPAKQ8N1N5 446 aa14.33□□□□□ -0.12
TOP3B-206ENST00000436282 NXPE1Q8N323 547 aa14.33□□□□□ -0.12
TOP3B-206ENST00000436282 PXYLP1Q8TE99 480 aa14.33□□□□□ -0.12
TOP3B-206ENST00000436282 MAPKAP1Q9BPZ7 522 aa14.33□□□□□ -0.12
TOP3B-206ENST00000436282 C19orf43Q9BQ61 176 aa14.33□□□□□ -0.12
TOP3B-206ENST00000436282 CWH43Q9H720 699 aa14.33□□□□□ -0.12
TOP3B-206ENST00000436282 THSD1Q9NS62 852 aa14.33□□□□□ -0.12
TOP3B-206ENST00000436282 MKI67P46013 3256 aaKnown RBP14.32□□□□□ -0.12
TOP3B-206ENST00000436282 H3BM21 787 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 SCAMP2O15127 329 aaKnown RBP14.32□□□□□ -0.12
TOP3B-206ENST00000436282 SMAD6O43541 496 aaKnown RBP14.32□□□□□ -0.12
TOP3B-206ENST00000436282 TRBC1P01850 177 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 JUPP14923 745 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 BPIP17213 487 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 ENDOUP21128 410 aaKnown RBP14.32□□□□□ -0.12
TOP3B-206ENST00000436282 HNMTP50135 292 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 GAB1Q13480 694 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 GPR33Q49SQ1 333 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 Q5BKY6 102 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 NAGSQ8N159 534 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 OVCA2Q8WZ82 227 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 MAGEB10Q96LZ2 347 aaPredicted RBP14.32□□□□□ -0.12
TOP3B-206ENST00000436282 COPS8Q99627 209 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 SLC12A9Q9BXP2 914 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 TIGARQ9NQ88 270 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 RPRD1BQ9NQG5 326 aaKnown RBP14.32□□□□□ -0.12
TOP3B-206ENST00000436282 KLHL42Q9P2K6 505 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 NUFIP1Q9UHK0 495 aaKnown RBP14.32□□□□□ -0.12
TOP3B-206ENST00000436282 OGDHLQ9ULD0 1010 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 RUVBL1Q9Y265 456 aaKnown RBP14.32□□□□□ -0.12
TOP3B-206ENST00000436282 PRRC2BQ5JSZ5 2229 aaKnown RBP14.32□□□□□ -0.12
TOP3B-206ENST00000436282 LINC00854A0A1B0GVQ3 168 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 CCDC182A6NF36 153 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 PCDH7O60245 1069 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 OR1E2P47887 323 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 RUNX1T1Q06455 604 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 TAB1Q15750 504 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 DUSP7Q16829 419 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 PTCHD4Q6ZW05 846 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 NPAS3Q8IXF0 933 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 APCDD1Q8J025 514 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 FAM181AQ8N9Y4 354 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 VANGL1Q8TAA9 524 aaPredicted RBP14.32□□□□□ -0.12
TOP3B-206ENST00000436282 COQ8BQ96D53 544 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 MED30Q96HR3 178 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 FYTTD1Q96QD9 318 aaKnown RBP14.32□□□□□ -0.12
TOP3B-206ENST00000436282 FAM129BQ96TA1 746 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 ACOXLQ9NUZ1 547 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 DNAJC11Q9NVH1 559 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 VPS29Q9UBQ0 182 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 SEC14L4Q9UDX3 406 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 SLC22A14Q9Y267 594 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 CMAHPQ9Y471 501 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 BACE2Q9Y5Z0 518 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 IQCMA0A1B0GVH7 501 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 ZAR1LA6NP61 321 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 HIST1H2AGP0C0S8 130 aaPredicted RBP14.32□□□□□ -0.12
TOP3B-206ENST00000436282 HIST1H2ADP20671 130 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 CHIT1Q13231 466 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 CPTPQ5TA50 214 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 TRIM69Q86WT6 500 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 RDH10Q8IZV5 341 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 VPS37AQ8NEZ2 397 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 HIST1H2AHQ96KK5 128 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 HIST1H2AJQ99878 128 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 H2AFJQ9BTM1 129 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 SNTG1Q9NSN8 517 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 FTSJ1Q9UET6 329 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 HCN4Q9Y3Q4 1203 aa14.32□□□□□ -0.12
TOP3B-206ENST00000436282 ZNF670-ZNF695F2Z2N8 137 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 EIF3FO00303 357 aaPredicted RBP14.31□□□□□ -0.12
TOP3B-206ENST00000436282 CLDN7O95471 211 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 ALPPP05187 535 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 C8GP07360 202 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 POU2F1P14859 743 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 SPAM1P38567 509 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 MLLT3P42568 568 aaPredicted RBP14.31□□□□□ -0.12
TOP3B-206ENST00000436282 NSG1P42857 185 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 ZNF33BQ06732 778 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms