RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 IPPKQ9H8X2 491 aa15.32■□□□□ 0.04
SMPD4-207ENST00000435455 ANKZF1Q9H8Y5 726 aa15.32■□□□□ 0.04
SMPD4-207ENST00000435455 ACTR8Q9H981 624 aa15.32■□□□□ 0.04
SMPD4-207ENST00000435455 COPS7BQ9H9Q2 264 aaPredicted RBP15.32■□□□□ 0.04
SMPD4-207ENST00000435455 PCDHGA11Q9Y5H2 935 aa15.32■□□□□ 0.04
SMPD4-207ENST00000435455 ESPNB1AK53 854 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 E2F3O00716 465 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 B3GALT2O43825 422 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 PRMT3O60678 531 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 CDC123O75794 336 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-207ENST00000435455 SIX3O95343 332 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-207ENST00000435455 SLU7O95391 586 aaKnown RBP15.31■□□□□ 0.04
SMPD4-207ENST00000435455 TBX6O95947 436 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-207ENST00000435455 PCNAP12004 261 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 EEF1DP29692 281 aaKnown RBP15.31■□□□□ 0.04
SMPD4-207ENST00000435455 PLA2G16P53816 162 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 TMEM35AQ53FP2 167 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 JMJD6Q6NYC1 403 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-207ENST00000435455 ABHD17CQ6PCB6 329 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 QSOX2Q6ZRP7 698 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 CHSY3Q70JA7 882 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 GOLGA7Q7Z5G4 137 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 MYLK4Q86YV6 388 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-207ENST00000435455 SHISA5Q8N114 240 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 CA13Q8N1Q1 262 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 ZADH2Q8N4Q0 377 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 ADAMTS18Q8TE60 1221 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 ZNF473Q8WTR7 871 aaKnown RBP15.31■□□□□ 0.04
SMPD4-207ENST00000435455 PNPLA2Q96AD5 504 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 REPS1Q96D71 796 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 CMTM7Q96FZ5 175 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 IMMP1LQ96LU5 166 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 KCNC2Q96PR1 638 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 F2RL3Q96RI0 385 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 SERINC2Q96SA4 455 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 MS4A8Q9BY19 250 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 TSC22D4Q9Y3Q8 395 aa15.31■□□□□ 0.04
SMPD4-207ENST00000435455 A0A0G2JN53 185 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 OR2W5A6NFC9 320 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 B4GALT2O60909 372 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 DNAJB6O75190 326 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 SEC24DO94855 1032 aaPredicted RBP15.3■□□□□ 0.04
SMPD4-207ENST00000435455 UBR5O95071 2799 aaPredicted RBP15.3■□□□□ 0.04
SMPD4-207ENST00000435455 GSTA1P08263 222 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 TAC1P20366 129 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 PIK3CBP42338 1070 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 CCNG1P51959 295 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 MTTPP55157 894 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 PHEXP78562 749 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 ACTN3Q08043 901 aaPredicted RBP15.3■□□□□ 0.04
SMPD4-207ENST00000435455 RCN2Q14257 317 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 NADK2Q4G0N4 442 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 CRB2Q5IJ48 1285 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 COLEC12Q5KU26 742 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 ADNP2Q6IQ32 1131 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 IGFL2Q6UWQ7 119 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 ISLR2Q6UXK2 745 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 TDRPQ86YL5 185 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 RBMXL3Q8N7X1 1067 aaKnown RBP15.3■□□□□ 0.04
SMPD4-207ENST00000435455 L3MBTL4Q8NA19 623 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 ARMC2Q8NEN0 867 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 ATP6V1E2Q96A05 226 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 CENPKQ9BS16 269 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 TBCDQ9BTW9 1192 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 MFRPQ9BY79 579 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 TRIM4Q9C037 500 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 EPS8L2Q9H6S3 715 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 TBK1Q9UHD2 729 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 PCTPQ9UKL6 214 aa15.3■□□□□ 0.04
SMPD4-207ENST00000435455 MRPS33Q9Y291 106 aaKnown RBP15.3■□□□□ 0.04
SMPD4-207ENST00000435455 H0YIV9 168 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 CLDN9O95484 217 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 UQCRHP07919 91 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 RAB38P57729 211 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 OR4D2P58180 307 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 DDX39BQ13838 428 aaKnown RBP15.29■□□□□ 0.04
SMPD4-207ENST00000435455 EXT1Q16394 746 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 SFT2D3Q587I9 215 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 SLC6A19Q695T7 634 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 PLAG1Q6DJT9 500 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 TSLPQ969D9 159 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 PTCHD1Q96NR3 888 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 LMF1Q96S06 567 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 LPAR4Q99677 370 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 NTMT1Q9BV86 223 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 NOL11Q9H8H0 719 aaKnown RBP15.29■□□□□ 0.04
SMPD4-207ENST00000435455 SLAMF7Q9NQ25 335 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 PRDM9Q9NQV7 894 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 B3GNT3Q9Y2A9 372 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 MMACHCQ9Y4U1 282 aa15.29■□□□□ 0.04
SMPD4-207ENST00000435455 IGHV3-20A0A0C4DH32 117 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 TTLL8A6PVC2 850 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 A8MT66 165 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 CLDN4O14493 209 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 SORBS2O94875 1100 aaKnown RBP15.28■□□□□ 0.04
SMPD4-207ENST00000435455 TGFB1P01137 390 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 SHBGP04278 402 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 PYGBP11216 843 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 CERS1P27544 350 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 ARL1P40616 181 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms