RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 CLK4Q9HAZ1 481 aaKnown RBP20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 NSMCE4AQ9NXX6 385 aa20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 RNF14Q9UBS8 474 aa20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 PHGDHO43175 533 aaKnown RBP20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 NME2P1O60361 137 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 WISP3O95389 354 aaPredicted RBP20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 NME2P22392 152 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 TNFRSF8P28908 595 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 CASQ1P31415 396 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 PAFAH1B1P43034 410 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 MLF1P58340 268 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 STXBP1P61764 594 aaKnown RBP20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 ADORA2A-AS1P86434 159 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 HSF1Q00613 529 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 TGFBIQ15582 683 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 MTFR2Q6P444 385 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 TMIGD1Q6UXZ0 262 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 RPTNQ6XPR3 784 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 SIAH3Q8IW03 269 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 KLHDC8AQ8IYD2 350 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 CPSF7Q8N684 471 aaKnown RBP20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 FAM98AQ8NCA5 519 aaKnown RBP20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 ARMC2Q8NEN0 867 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 DERL2Q9GZP9 239 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 POPDC3Q9HBV1 291 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 MTO1Q9Y2Z2 717 aaKnown RBP20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 KLF2Q9Y5W3 355 aaPredicted RBP20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 ABCA12Q86UK0 2595 aa20.4■□□□□ 0.86
RPUSD3-206ENST00000433535 ENO4A6NNW6 628 aa20.39■□□□□ 0.85
RPUSD3-206ENST00000433535 CXorf49A8MYA2 514 aaPredicted RBP20.39■□□□□ 0.85
RPUSD3-206ENST00000433535 ERI3O43414 337 aaKnown RBP20.39■□□□□ 0.85
RPUSD3-206ENST00000433535 MYO1DO94832 1006 aa20.39■□□□□ 0.85
RPUSD3-206ENST00000433535 MLYCDO95822 493 aa20.39■□□□□ 0.85
RPUSD3-206ENST00000433535 SSTR1P30872 391 aa20.39■□□□□ 0.85
RPUSD3-206ENST00000433535 CYB561P49447 251 aa20.39■□□□□ 0.85
RPUSD3-206ENST00000433535 SLC12A2P55011 1212 aa20.39■□□□□ 0.85
RPUSD3-206ENST00000433535 RUNX2Q13950 521 aa20.39■□□□□ 0.85
RPUSD3-206ENST00000433535 RNFT1Q5M7Z0 435 aa20.39■□□□□ 0.85
RPUSD3-206ENST00000433535 ADNP2Q6IQ32 1131 aa20.39■□□□□ 0.85
RPUSD3-206ENST00000433535 BNC2Q6ZN30 1099 aaPredicted RBP20.39■□□□□ 0.85
RPUSD3-206ENST00000433535 MS4A6EQ96DS6 147 aa20.39■□□□□ 0.85
RPUSD3-206ENST00000433535 FAR2Q96K12 515 aa20.39■□□□□ 0.85
RPUSD3-206ENST00000433535 DPH5Q9H2P9 285 aa20.39■□□□□ 0.85
RPUSD3-206ENST00000433535 WWOXQ9NZC7 414 aa20.39■□□□□ 0.85
RPUSD3-206ENST00000433535 PCNX1Q96RV3 2341 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 NCOA6Q14686 2063 aaPredicted RBP20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 TRBV11-1A0A0K0K1C0 115 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 LRIT2A6NDA9 550 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 TGFBR3LH3BV60 316 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 TAPBPO15533 448 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 H2AFYO75367 372 aaKnown RBP20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 ZNF24P17028 368 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 HTR1EP28566 365 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 PPP2R1BP30154 601 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 HNRNPFP52597 415 aaKnown RBP20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 POU4F1Q01851 419 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 KRTCAP3Q53RY4 240 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 NCCRP1Q6ZVX7 275 aaPredicted RBP20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 VN1R5Q7Z5H4 357 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 SPPL2CQ8IUH8 684 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 MCEMP1Q8IX19 187 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 FAM47BQ8NA70 645 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 APCDD1LQ8NCL9 501 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 TMEM52Q8NDY8 209 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 PYROXD1Q8WU10 500 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 ESAMQ96AP7 390 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 DEFB126Q9BYW3 111 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 SAYSD1Q9NPB0 183 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 PNO1Q9NRX1 252 aaKnown RBP20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 ZNF835Q9Y2P0 537 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 MMACHCQ9Y4U1 282 aa20.38■□□□□ 0.85
RPUSD3-206ENST00000433535 ASNA1O43681 348 aa20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 PRAMEF4O60810 478 aa20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 TBX6O95947 436 aaPredicted RBP20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 SNRPB2P08579 225 aaKnown RBP20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 CCDC166P0CW27 439 aa20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 ESRRAP11474 423 aaPredicted RBP20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 PLA2G16P53816 162 aa20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 NAA30Q147X3 362 aaPredicted RBP20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 OR4D1Q15615 310 aa20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 PRAMEF9Q5VWM5 478 aa20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 Q6ZPB1 254 aaPredicted RBP20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 SCUBE1Q8IWY4 988 aa20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 KRT78Q8N1N4 520 aa20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 B3GNT7Q8NFL0 401 aa20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 TTLQ8NG68 377 aa20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 TRIM45Q9H8W5 580 aaPredicted RBP20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 PRTFDC1Q9NRG1 225 aa20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 DNAJC11Q9NVH1 559 aa20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 ZNF223Q9UK11 482 aaPredicted RBP20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 CLDN16Q9Y5I7 305 aa20.37■□□□□ 0.85
RPUSD3-206ENST00000433535 FCHO1O14526 889 aa20.36■□□□□ 0.85
RPUSD3-206ENST00000433535 B3GALT2O43825 422 aa20.36■□□□□ 0.85
RPUSD3-206ENST00000433535 ABOP16442 354 aa20.36■□□□□ 0.85
RPUSD3-206ENST00000433535 CERS1P27544 350 aa20.36■□□□□ 0.85
RPUSD3-206ENST00000433535 TRHRP34981 398 aaPredicted RBP20.36■□□□□ 0.85
RPUSD3-206ENST00000433535 GMPRP36959 345 aa20.36■□□□□ 0.85
RPUSD3-206ENST00000433535 HSPA7P48741 367 aa20.36■□□□□ 0.85
RPUSD3-206ENST00000433535 HLCSP50747 726 aa20.36■□□□□ 0.85
RPUSD3-206ENST00000433535 RAB38P57729 211 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms