RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.91■□□□□ 0.14
USHBP1-203ENST00000431146 SCN3AQ9NY46 2000 aa15.9■□□□□ 0.14
USHBP1-203ENST00000431146 TRBC2A0A5B9 178 aa15.9■□□□□ 0.14
USHBP1-203ENST00000431146 C4orf51C9J302 202 aa15.9■□□□□ 0.14
USHBP1-203ENST00000431146 CAPN5O15484 640 aaPredicted RBP15.9■□□□□ 0.14
USHBP1-203ENST00000431146 IGLV3-19P01714 112 aa15.9■□□□□ 0.14
USHBP1-203ENST00000431146 RABIFP47224 123 aa15.9■□□□□ 0.14
USHBP1-203ENST00000431146 COX20Q5RI15 118 aa15.9■□□□□ 0.14
USHBP1-203ENST00000431146 TMEM214Q6NUQ4 689 aaKnown RBP15.9■□□□□ 0.14
USHBP1-203ENST00000431146 WASH2PQ6VEQ5 465 aa15.9■□□□□ 0.14
USHBP1-203ENST00000431146 RGMAQ96B86 450 aa15.9■□□□□ 0.14
USHBP1-203ENST00000431146 FCRL4Q96PJ5 515 aa15.9■□□□□ 0.14
USHBP1-203ENST00000431146 TEFMQ96QE5 360 aaKnown RBP15.9■□□□□ 0.14
USHBP1-203ENST00000431146 PHF12Q96QT6 1004 aa15.9■□□□□ 0.14
USHBP1-203ENST00000431146 UGT2B28Q9BY64 529 aa15.9■□□□□ 0.14
USHBP1-203ENST00000431146 SRMSQ9H3Y6 488 aa15.9■□□□□ 0.14
USHBP1-203ENST00000431146 NTN4Q9HB63 628 aa15.9■□□□□ 0.14
USHBP1-203ENST00000431146 TEX10Q9NXF1 929 aaPredicted RBP15.9■□□□□ 0.14
USHBP1-203ENST00000431146 PCOLCE2Q9UKZ9 415 aa15.9■□□□□ 0.14
USHBP1-203ENST00000431146 BLOC1S6Q9UL45 172 aa15.9■□□□□ 0.14
USHBP1-203ENST00000431146 KRBA1A5PL33 1030 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 LRIT2A6NDA9 550 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 CLOCKO15516 846 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 GPR37L1O60883 481 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 ZNF682O95780 498 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 RETP07949 1114 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 THEGLP0DJG4 465 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 ZNF23P17027 643 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 CD6P30203 668 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 SHMT2P34897 504 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 GRK3P35626 688 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 VMACQ2NL98 169 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 TBPL2Q6SJ96 375 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 PAGE2Q7Z2X7 111 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 NAGSQ8N159 534 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 SLC35A5Q9BS91 424 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 PITHD1Q9GZP4 211 aaPredicted RBP15.89■□□□□ 0.13
USHBP1-203ENST00000431146 Q9H521 79 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 GPATCH2Q9NW75 528 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 TRNAU1APQ9NX07 287 aaKnown RBP15.89■□□□□ 0.13
USHBP1-203ENST00000431146 RAPGEFL1Q9UHV5 662 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 MAGED1Q9Y5V3 778 aaPredicted RBP15.89■□□□□ 0.13
USHBP1-203ENST00000431146 DGKBQ9Y6T7 804 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 EI24O14681 340 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 CMPK1P30085 196 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 HSPA13P48723 471 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 IST1P53990 364 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 ILF3Q12906 894 aaKnown RBP eCLIP15.89■□□□□ 0.13
USHBP1-203ENST00000431146 PPP1R8Q12972 351 aaKnown RBP15.89■□□□□ 0.13
USHBP1-203ENST00000431146 EIF2B5Q13144 721 aaKnown RBP15.89■□□□□ 0.13
USHBP1-203ENST00000431146 FZD5Q13467 585 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 C1orf61Q13536 156 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 MAP7Q14244 749 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 RGNQ15493 299 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 INTS11Q5TA45 600 aaKnown RBP15.89■□□□□ 0.13
USHBP1-203ENST00000431146 UGT2A3Q6UWM9 527 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 ZNF793Q6ZN11 406 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 IKBIPQ70UQ0 350 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 NUDT13Q86X67 352 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 MARVELD2Q8N4S9 558 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 OR10G6Q8NH81 332 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 CDX2Q99626 313 aaPredicted RBP15.89■□□□□ 0.13
USHBP1-203ENST00000431146 TMEM184CQ9NVA4 438 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 OR6C2Q9NZP2 312 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 ZNF282Q9UDV7 671 aaPredicted RBP15.89■□□□□ 0.13
USHBP1-203ENST00000431146 SCOCQ9UIL1 159 aa15.89■□□□□ 0.13
USHBP1-203ENST00000431146 A0A1W2PRB8 838 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 WASHC1A8K0Z3 465 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 UPK1AO00322 258 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 DLGAP1O14490 977 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 KDM1AO60341 852 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 CLEC3AO75596 197 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 TNFP01375 233 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 DDCP20711 480 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 NDUFS1P28331 727 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 AQP1P29972 269 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 SERPINB1P30740 379 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 SOAT1P35610 550 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 RPL3P39023 403 aaKnown RBP15.88■□□□□ 0.13
USHBP1-203ENST00000431146 CRATP43155 626 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 SSR2P43308 183 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 CCR5P51681 352 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 HYAL2Q12891 473 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 GPR18Q14330 331 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 CPZQ66K79 652 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 OR4C11Q6IEV9 310 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 DGLUCYQ7Z3D6 616 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.88■□□□□ 0.13
USHBP1-203ENST00000431146 SLC6A18Q96N87 628 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 C9orf16Q9BUW7 83 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 KLHL25Q9H0H3 589 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 CHST8Q9H2A9 424 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 SLAMF7Q9NQ25 335 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 SNX11Q9Y5W9 270 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 DPPA5A6NC42 116 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 PRKRAO75569 313 aaKnown RBP15.88■□□□□ 0.13
USHBP1-203ENST00000431146 ETFAP13804 333 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 ABATP80404 500 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 FZD2Q14332 565 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 OTUD3Q5T2D3 398 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms