RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 TRBC2A0A5B9 178 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 BLOC1S5-TXNDC5H3BN57 136 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 MTHFD1P11586 935 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 DNAJB1P25685 340 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 KRR1Q13601 381 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 ZNF77Q15935 545 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 IER5LQ5T953 404 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 OR4C11Q6IEV9 310 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 PIANPQ8IYJ0 282 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 ZNF433Q8N7K0 673 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 ASB15Q8WXK1 588 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 TVP23BQ9NYZ1 205 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 EHD3Q9NZN3 535 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 STOX2Q9P2F5 926 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 TIFABQ6ZNK6 161 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 AGBL5Q8NDL9 886 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 OR6C4Q8NGE1 309 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 RHEBL1Q8TAI7 183 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 FGF14Q92915 247 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 OR1F2PQ96R84 312 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 TRIB3Q96RU7 358 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 PELOQ9BRX2 385 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 ASPNQ9BXN1 380 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 MARK1Q9P0L2 795 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 SSC5DA1L4H1 1573 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 A0A0A6YYC8 382 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 SOBPA7XYQ1 873 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 EFCAB7A8K855 629 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 I3L1I5 382 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 FDXRP22570 491 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 RCVRNP35243 200 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 YPEL5P62699 121 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 EMX2Q04743 252 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 PCLAFQ15004 111 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 TLR1Q15399 786 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 SYT16Q17RD7 645 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 TECRLQ5HYJ1 363 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 OR52E8Q6IFG1 317 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 RBM4BQ9BQ04 359 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 RBM4Q9BWF3 364 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 PLGRKTQ9HBL7 147 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 SOX1O00570 391 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 CPNE3O75131 537 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 SLC35E2BP0CK96 405 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 PRKAR1AP10644 381 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 TIA1P31483 386 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 DNASE1L1P49184 302 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 TMEM107Q6UX40 140 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 POLR2J3Q9H1A7 115 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 ACOT7O00154 380 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 SEC14L5O43304 696 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 ARG2P78540 354 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 PUM1Q14671 1186 aaKnown RBP eCLIP16.41■□□□□ 0.221e-7■□□□□ 10.8
SMARCA4-203ENST00000429416 CRB2Q5IJ48 1285 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 TMEM225Q6GV28 225 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 ARL14Q8N4G2 192 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 FITM2Q8N6M3 262 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 NUP43Q8NFH3 380 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.41■□□□□ 0.228e-8■■□□□ 12.6
SMARCA4-203ENST00000429416 LRRC58Q96CX6 371 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 TMCO6Q96DC7 493 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 LRCH3Q96II8 777 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 CSNK1DP48730 415 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 CDK9P50750 372 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 TMEM35AQ53FP2 167 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 SYVN1Q86TM6 617 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 TMEM74Q96NL1 305 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 SPRTNQ9H040 489 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 SHISA7A6NL88 538 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 A8MVJ9 347 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 RPLP0P05388 317 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 RACK1P63244 317 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 COL13A1Q5TAT6 717 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 THAP5Q7Z6K1 395 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 PQLC1Q8N2U9 271 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 OR10H4Q8NGA5 316 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 EPB41L1Q9H4G0 881 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 HPF1Q9NWY4 346 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 MMP17Q9ULZ9 603 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 LRCH1Q9Y2L9 728 aa16.41■□□□□ 0.22
SMARCA4-203ENST00000429416 UGT2B11O75310 529 aa16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 RSL1D1O76021 490 aaKnown RBP16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 PORP16435 677 aaPredicted RBP16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 ACVR2AP27037 513 aa16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 GMPRP36959 345 aa16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 OMPP47874 163 aa16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 CTBP2P56545 445 aa16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 PTGR1Q14914 329 aa16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 FAR1Q8WVX9 515 aa16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 MOCOSQ96EN8 888 aa16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 CDX2Q99626 313 aaPredicted RBP16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 ULBP3Q9BZM4 244 aa16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 SLC24A3Q9HC58 644 aa16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 MTMR10Q9NXD2 777 aa16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 CYB5AP00167 134 aa16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 CSTAP01040 98 aa16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 C9P02748 559 aa16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 ALDOAP04075 364 aaKnown RBP16.4■□□□□ 0.22
SMARCA4-203ENST00000429416 PRDX6P30041 224 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms