RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 PRKAB1Q9Y478 270 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 PCDHGB1Q9Y5G3 927 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 C2orf16Q68DN1 1984 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 A0A1B0GVG6 124 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 A0A1W2PPW3 197 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 IGLON5A6NGN9 336 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 ADH1BP00325 375 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 HTR1AP08908 422 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 UQCRC2P22695 453 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 RRM2P31350 389 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 GJA4P35212 333 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 PLA2G16P53816 162 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 ERVK-21P61565 698 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 REEP5Q00765 189 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 MC1RQ01726 317 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 NFATC3Q12968 1075 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 AGERQ15109 404 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 IQCCQ4KMZ1 466 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 COX20Q5RI15 118 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 KHDRBS2Q5VWX1 349 aaKnown RBP13.09□□□□□ -0.31
THBS3-202ENST00000428962 VN1R5Q7Z5H4 357 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 SVOPQ8N4V2 548 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 ZNF740Q8NDX6 193 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 RNF217Q8TC41 542 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 BCL7BQ9BQE9 202 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 GABARAPL3Q9BY60 117 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 CCDC90BQ9GZT6 254 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 NAA50Q9GZZ1 169 aaKnown RBP13.09□□□□□ -0.31
THBS3-202ENST00000428962 NT5DC2Q9H857 520 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 THSD1Q9NS62 852 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 WARS2Q9UGM6 360 aaKnown RBP13.09□□□□□ -0.31
THBS3-202ENST00000428962 ACSL5Q9ULC5 683 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 PTGES3LE9PB15 166 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 TNFRSF11BO00300 401 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 TBX19O60806 448 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 PCDH8O95206 1070 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 APODP05090 189 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 TPP2P29144 1249 aaPredicted RBP13.09□□□□□ -0.31
THBS3-202ENST00000428962 DRD3P35462 400 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 MAPK12P53778 367 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 CSNK2BP67870 215 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 CDK6Q00534 326 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 CST6Q15828 149 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 WSCD2Q2TBF2 565 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 DEPDC1Q5TB30 811 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 EGFLAMQ63HQ2 1017 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 VITQ6UXI7 678 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 ZNF852Q6ZMS4 543 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 B3GNT8Q7Z7M8 397 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 LMNTD1Q8N9Z9 388 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 ABHD11Q8NFV4 315 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 NFKBIDQ8NI38 313 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 GIPC3Q8TF64 312 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 GEMIN6Q8WXD5 167 aaKnown RBP13.09□□□□□ -0.31
THBS3-202ENST00000428962 TEX101Q9BY14 249 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 NLNQ9BYT8 704 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 WDR26Q9H7D7 661 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 C1GALT1Q9NS00 363 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 GPATCH2Q9NW75 528 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 SLC23A2Q9UGH3 650 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 PSME2Q9UL46 239 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 PCYT1BQ9Y5K3 369 aaPredicted RBP13.09□□□□□ -0.31
THBS3-202ENST00000428962 STON1Q9Y6Q2 735 aa13.09□□□□□ -0.31
THBS3-202ENST00000428962 LAMA3Q16787 3333 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 MYO7AQ13402 2215 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 ZNF99A8MXY4 864 aaPredicted RBP13.08□□□□□ -0.32
THBS3-202ENST00000428962 MID1O15344 667 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 CAPN5O15484 640 aaPredicted RBP13.08□□□□□ -0.32
THBS3-202ENST00000428962 GCM2O75603 506 aaPredicted RBP13.08□□□□□ -0.32
THBS3-202ENST00000428962 KLHL18O94889 574 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 BCL10O95999 233 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 ARAFP10398 606 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 DDCP20711 480 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 C5AR1P21730 350 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 PCMT1P22061 227 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 MVKQ03426 396 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 NPRL3Q12980 569 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 HEPACAMQ14CZ8 416 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 MAD2L1BPQ15013 274 aaPredicted RBP13.08□□□□□ -0.32
THBS3-202ENST00000428962 MPEG1Q2M385 716 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 PROX2Q3B8N5 592 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 CRB2Q5IJ48 1285 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 FGD3Q5JSP0 725 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 AGBL4Q5VU57 503 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 TANGO2Q6ICL3 276 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 RNF130Q86XS8 419 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 IPCEF1Q8WWN9 437 aaPredicted RBP13.08□□□□□ -0.32
THBS3-202ENST00000428962 SGCDQ92629 289 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 CDCA3Q99618 268 aaPredicted RBP13.08□□□□□ -0.32
THBS3-202ENST00000428962 ACAT2Q9BWD1 397 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 MS4A8Q9BY19 250 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 DGCR6LQ9BY27 220 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 LMAN2LQ9H0V9 348 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 RSPH9Q9H1X1 276 aaPredicted RBP13.08□□□□□ -0.32
THBS3-202ENST00000428962 NEUROD4Q9HD90 331 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 PHPT1Q9NRX4 125 aaPredicted RBP13.08□□□□□ -0.32
THBS3-202ENST00000428962 EXD2Q9NVH0 621 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 PAK1IP1Q9NWT1 392 aaPredicted RBP13.08□□□□□ -0.32
THBS3-202ENST00000428962 NDUFAF4Q9P032 175 aa13.08□□□□□ -0.32
THBS3-202ENST00000428962 ACSL6Q9UKU0 697 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms