RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 IL2P60568 153 aa15.44■□□□□ 0.06
VARS-216ENST00000428445 BTN3A2P78410 334 aa15.44■□□□□ 0.06
VARS-216ENST00000428445 PDAP1Q13442 181 aaKnown RBP15.44■□□□□ 0.06
VARS-216ENST00000428445 RUNX2Q13950 521 aa15.44■□□□□ 0.06
VARS-216ENST00000428445 CMPK2Q5EBM0 449 aa15.44■□□□□ 0.06
VARS-216ENST00000428445 RNASEH2BQ5TBB1 312 aaKnown RBP15.44■□□□□ 0.06
VARS-216ENST00000428445 ABHD13Q7L211 337 aa15.44■□□□□ 0.06
VARS-216ENST00000428445 TMPRSS11BQ86T26 416 aa15.44■□□□□ 0.06
VARS-216ENST00000428445 THOC6Q86W42 341 aaKnown RBP15.44■□□□□ 0.06
VARS-216ENST00000428445 PPIL6Q8IXY8 311 aa15.44■□□□□ 0.06
VARS-216ENST00000428445 ACBD4Q8NC06 268 aa15.44■□□□□ 0.06
VARS-216ENST00000428445 APCDD1LQ8NCL9 501 aa15.44■□□□□ 0.06
VARS-216ENST00000428445 TMEM52Q8NDY8 209 aa15.44■□□□□ 0.06
VARS-216ENST00000428445 PDLIM2Q96JY6 352 aa15.44■□□□□ 0.06
VARS-216ENST00000428445 SLC6A16Q9GZN6 736 aa15.44■□□□□ 0.06
VARS-216ENST00000428445 CLK4Q9HAZ1 481 aaKnown RBP15.44■□□□□ 0.06
VARS-216ENST00000428445 MCCC2Q9HCC0 563 aa15.44■□□□□ 0.06
VARS-216ENST00000428445 PRDM9Q9NQV7 894 aa15.44■□□□□ 0.06
VARS-216ENST00000428445 NPDC1Q9NQX5 325 aaPredicted RBP15.44■□□□□ 0.06
VARS-216ENST00000428445 SLC22A14Q9Y267 594 aa15.44■□□□□ 0.06
VARS-216ENST00000428445 DNAJC13O75165 2243 aa15.44■□□□□ 0.06
VARS-216ENST00000428445 CDC7O00311 574 aa15.43■□□□□ 0.06
VARS-216ENST00000428445 ITGA10O75578 1167 aa15.43■□□□□ 0.06
VARS-216ENST00000428445 RNH1P13489 461 aaKnown RBP15.43■□□□□ 0.06
VARS-216ENST00000428445 SKP1P63208 163 aa15.43■□□□□ 0.06
VARS-216ENST00000428445 REEP5Q00765 189 aa15.43■□□□□ 0.06
VARS-216ENST00000428445 TEDDM1Q5T9Z0 273 aa15.43■□□□□ 0.06
VARS-216ENST00000428445 TRMT10BQ6PF06 316 aaKnown RBP15.43■□□□□ 0.06
VARS-216ENST00000428445 NXPE4Q6UWF7 544 aa15.43■□□□□ 0.06
VARS-216ENST00000428445 SBSNQ6UWP8 590 aa15.43■□□□□ 0.06
VARS-216ENST00000428445 KIAA0408Q6ZU52 694 aa15.43■□□□□ 0.06
VARS-216ENST00000428445 GALNT7Q86SF2 657 aa15.43■□□□□ 0.06
VARS-216ENST00000428445 CCDC71Q8IV32 467 aaPredicted RBP15.43■□□□□ 0.06
VARS-216ENST00000428445 TMEM156Q8N614 296 aa15.43■□□□□ 0.06
VARS-216ENST00000428445 CREB3L4Q8TEY5 395 aa15.43■□□□□ 0.06
VARS-216ENST00000428445 PPANQ9NQ55 473 aaKnown RBP15.43■□□□□ 0.06
VARS-216ENST00000428445 DEPPQ9NTK1 212 aa15.43■□□□□ 0.06
VARS-216ENST00000428445 COQ3Q9NZJ6 369 aa15.43■□□□□ 0.06
VARS-216ENST00000428445 KCMF1Q9P0J7 381 aa15.43■□□□□ 0.06
VARS-216ENST00000428445 RNF6Q9Y252 685 aa15.43■□□□□ 0.06
VARS-216ENST00000428445 KLF13Q9Y2Y9 288 aaPredicted RBP15.43■□□□□ 0.06
VARS-216ENST00000428445 VWA7Q9Y334 891 aa15.43■□□□□ 0.06
VARS-216ENST00000428445 G3V3Y1 287 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 KLRC4-KLRK1H3BQV0 150 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 PSMD12O00232 456 aaPredicted RBP15.42■□□□□ 0.06
VARS-216ENST00000428445 FCHO1O14526 889 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 DIAPH2O60879 1101 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 SAT1P21673 171 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 AHRP35869 848 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 GDF5P43026 501 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 FNTAP49354 379 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 ZNF460Q14592 562 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 BBS9Q3SYG4 887 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 XKR6Q5GH73 641 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 EMC4Q5J8M3 183 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 STRA8Q7Z7C7 330 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 CNTN4Q8IWV2 1026 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 CYP4Z2PQ8N1L4 340 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 TBC1D19Q8N5T2 526 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 C16orf52Q8NHV5 167 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 ACTRT1Q8TDG2 376 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 NRGNQ92686 78 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 NCLNQ969V3 563 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 CERS2Q96G23 380 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 CFAP36Q96G28 342 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 TRIM54Q9BYV2 358 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 PPP2R2CQ9Y2T4 447 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 DYRK1BQ9Y463 629 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 CLDN16Q9Y5I7 305 aa15.42■□□□□ 0.06
VARS-216ENST00000428445 A0A0G2JMM0 328 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 A0A1W2PPB8 328 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 A0A1W2PRS3 328 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 PABPN1LA6NDY0 278 aaKnown RBP15.41■□□□□ 0.06
VARS-216ENST00000428445 NPEPPSL1A6NEC2 478 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 TMEM200CA6NKL6 621 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 FAM166BA8MTA8 275 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 KIR3DP1A8MWS1 328 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 CAPN3P20807 821 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 CLCN2P51788 898 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 AP1S2P56377 157 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 CCZ1BP86790 482 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 CCZ1P86791 482 aaPredicted RBP15.41■□□□□ 0.06
VARS-216ENST00000428445 PMPCAQ10713 525 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 SPANXN3Q5MJ09 141 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 CLNKQ7Z7G1 428 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.41■□□□□ 0.06
VARS-216ENST00000428445 ARMC10Q8N2F6 343 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 B3GNT7Q8NFL0 401 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 ATL1Q8WXF7 558 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 TREX2Q9BQ50 279 aaPredicted RBP15.41■□□□□ 0.06
VARS-216ENST00000428445 AIF1LQ9BQI0 150 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 WDR83Q9BRX9 315 aaKnown RBP15.41■□□□□ 0.06
VARS-216ENST00000428445 TNFRSF10DQ9UBN6 386 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 CORO1CQ9ULV4 474 aaPredicted RBP15.41■□□□□ 0.06
VARS-216ENST00000428445 PHF3Q92576 2039 aaKnown RBP15.41■□□□□ 0.06
VARS-216ENST00000428445 SPG11Q96JI7 2443 aa15.41■□□□□ 0.06
VARS-216ENST00000428445 PGRMC1O00264 195 aaKnown RBP15.4■□□□□ 0.06
VARS-216ENST00000428445 CES2O00748 559 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 TOXO94900 526 aa15.4■□□□□ 0.06
VARS-216ENST00000428445 HNRNPH1P31943 449 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms