RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 EMP2P54851 167 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 FOXA1P55317 472 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 WDR4P57081 412 aaKnown RBP6.66□□□□□ -1.34
CDC7-203ENST00000428239 ID2Q02363 134 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 SLAMF1Q13291 335 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 CAMK2BQ13554 666 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 ST3GAL2Q16842 350 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 ATP6AP1LQ52LC2 224 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 YOD1Q5VVQ6 348 aaPredicted RBP6.66□□□□□ -1.34
CDC7-203ENST00000428239 PRAMEF9Q5VWM5 478 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 WDR75Q8IWA0 830 aaKnown RBP6.66□□□□□ -1.34
CDC7-203ENST00000428239 FNDC5Q8NAU1 212 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 OR4K1Q8NGD4 311 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 OR51Q1Q8NH59 317 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 STT3BQ8TCJ2 826 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 AGAP11Q8TF27 550 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 GFM2Q969S9 779 aaKnown RBP6.66□□□□□ -1.34
CDC7-203ENST00000428239 VPS50Q96JG6 964 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 PTCHD1Q96NR3 888 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 PITHD1Q9GZP4 211 aaPredicted RBP6.66□□□□□ -1.34
CDC7-203ENST00000428239 IL17BQ9UHF5 180 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 PTGDR2Q9Y5Y4 395 aa6.66□□□□□ -1.34
CDC7-203ENST00000428239 MRPS18BQ9Y676 258 aaKnown RBP6.66□□□□□ -1.34
CDC7-203ENST00000428239 SCN3AQ9NY46 2000 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 GOLGA8QA0A0J9YX86 632 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 GOLGA8OA6NCC3 632 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 LRIT2A6NDA9 550 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 A6NL46 340 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 GOLGA8NF8WBI6 632 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 H0YIV9 168 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 H3BQF6 201 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 ATP8B1O43520 1251 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 CHST10O43529 356 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 TLX3O43711 291 aaPredicted RBP6.65□□□□□ -1.34
CDC7-203ENST00000428239 OR10H2O60403 315 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 GUCY1B2O75343 617 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 EPORP19235 508 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 GSTM2P28161 218 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 ABRAXAS2Q15018 415 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 NCF4Q15080 339 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 NSDHLQ15738 373 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 TMEM35AQ53FP2 167 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 NIPAL1Q6NVV3 410 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 RIPOR1Q6ZS17 1223 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 ZNF781Q8N8C0 355 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 GBP7Q8N8V2 638 aaPredicted RBP6.65□□□□□ -1.34
CDC7-203ENST00000428239 UTP15Q8TED0 518 aaKnown RBP6.65□□□□□ -1.34
CDC7-203ENST00000428239 NKD1Q969G9 470 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 TBCDQ9BTW9 1192 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 C1orf50Q9BV19 199 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 THAP1Q9NVV9 213 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 MAP4K5Q9Y4K4 846 aa6.65□□□□□ -1.34
CDC7-203ENST00000428239 POLR3HQ9Y535 204 aaPredicted RBP6.65□□□□□ -1.34
CDC7-203ENST00000428239 LOC101059948A0A1B0GTJ6 334 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 OR2W5A6NFC9 320 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 TMEM114B3SHH9 223 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 SLC28A1O00337 649 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 PIP5K1BO14986 540 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 AKAP10O43572 662 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 ITM2AO43736 263 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 DYRK3O43781 588 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 PRMT3O60678 531 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 LIFP15018 202 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 ALOX15P16050 662 aaPredicted RBP6.65□□□□□ -1.35
CDC7-203ENST00000428239 ITPKBP27987 946 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 PIK3CBP42338 1070 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 CSRP3P50461 194 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 RPL14P50914 215 aaKnown RBP6.65□□□□□ -1.35
CDC7-203ENST00000428239 MC1RQ01726 317 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 FAM53BQ14153 422 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 DEPDC1Q5TB30 811 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 RAB43Q86YS6 212 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 SPACA3Q8IXA5 215 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 TMEM151AQ8N4L1 468 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 ACOT4Q8N9L9 421 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 L3MBTL4Q8NA19 623 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 CLHC1Q8NHS4 586 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 ZNF75CPQ92670 426 aaPredicted RBP6.65□□□□□ -1.35
CDC7-203ENST00000428239 TBC1D20Q96BZ9 403 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 MS4A6EQ96DS6 147 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 CHMP6Q96FZ7 201 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 C10orf90Q96M02 699 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 DPH2Q9BQC3 489 aaPredicted RBP6.65□□□□□ -1.35
CDC7-203ENST00000428239 MS4A8Q9BY19 250 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 RABEP2Q9H5N1 569 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 LRTM1Q9HBL6 345 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 CPNE5Q9HCH3 593 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 PNO1Q9NRX1 252 aaKnown RBP6.65□□□□□ -1.35
CDC7-203ENST00000428239 GIMAP4Q9NUV9 329 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 PNPOQ9NVS9 261 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 DCTN4Q9UJW0 460 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 RAP2CQ9Y3L5 183 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 SNRNP200O75643 2136 aaKnown RBP6.65□□□□□ -1.35
CDC7-203ENST00000428239 KCNE1BA0A087WTH5 132 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 CDRT15L2A8MXV6 281 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 TCP11X1B4DZS4 312 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 PCDH7O60245 1069 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 LRATO95237 230 aa6.65□□□□□ -1.35
CDC7-203ENST00000428239 NSA2O95478 260 aaKnown RBP6.65□□□□□ -1.35
CDC7-203ENST00000428239 ANXA4P09525 319 aaPredicted RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms