RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 B3GNT3Q9Y2A9 372 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 NAALAD2Q9Y3Q0 740 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 MAU2Q9Y6X3 613 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 SCN2AQ99250 2005 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 LRRK2Q5S007 2527 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 TCRBV16S1A1N1A0A5B0 115 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 E2F3O00716 465 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 CLDN4O14493 209 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 SLC28A2O43868 658 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 CDH16O75309 829 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 PIAS1O75925 651 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 WISP1O95388 367 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 TBX6O95947 436 aaPredicted RBP8.61□□□□□ -1.03
SMC1A-203ENST00000428014 F12P00748 615 aaPredicted RBP8.61□□□□□ -1.03
SMC1A-203ENST00000428014 PRB1P04280 392 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 NUDT17P0C025 328 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 PRR35P0CG20 571 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 IL1RNP18510 177 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 GDF5P43026 501 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 HSPA7P48741 367 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 MTTPP55157 894 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 CHIT1Q13231 466 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 PCOLCEQ15113 449 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 TLR1Q15399 786 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 XKR6Q5GH73 641 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 DEPDC1Q5TB30 811 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 ABHD17CQ6PCB6 329 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 EMBQ6PCB8 327 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 CPEB2Q7Z5Q1 589 aaKnown RBP8.61□□□□□ -1.03
SMC1A-203ENST00000428014 SLC22A9Q8IVM8 553 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 SCUBE1Q8IWY4 988 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.61□□□□□ -1.03
SMC1A-203ENST00000428014 IQCKQ8N0W5 287 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 ZCCHC7Q8N3Z6 543 aaKnown RBP8.61□□□□□ -1.03
SMC1A-203ENST00000428014 TMEM151AQ8N4L1 468 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 GALNT11Q8NCW6 608 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 OR7G3Q8NG95 312 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 KCTD4Q8WVF5 259 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 PSMF1Q92530 271 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 MIB2Q96AX9 1013 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 FAR2Q96K12 515 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 QRFPRQ96P65 431 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 LPAR4Q99677 370 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 WDR77Q9BQA1 342 aaPredicted RBP8.61□□□□□ -1.03
SMC1A-203ENST00000428014 MS4A8Q9BY19 250 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 SPNS1Q9H2V7 528 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 EPB41L4BQ9H329 900 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 SOX17Q9H6I2 414 aaPredicted RBP8.61□□□□□ -1.03
SMC1A-203ENST00000428014 TRIM45Q9H8W5 580 aaPredicted RBP8.61□□□□□ -1.03
SMC1A-203ENST00000428014 MKS1Q9NXB0 559 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 DCDC2Q9UHG0 476 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 ADAM29Q9UKF5 820 aa8.61□□□□□ -1.03
SMC1A-203ENST00000428014 PCSK5Q92824 1860 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 SERTM1A2A2V5 107 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 CLEC18AA5D8T8 446 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 SUPT3HB4E1H0 165 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 TRIM49D1C9J1S8 452 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 PSMD12O00232 456 aaPredicted RBP8.6□□□□□ -1.03
SMC1A-203ENST00000428014 CHST10O43529 356 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 B3GALT2O43825 422 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 CCNT2O60583 730 aaKnown RBP8.6□□□□□ -1.03
SMC1A-203ENST00000428014 PRAMEF4O60810 478 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 SMIM24O75264 130 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 SUPT3HO75486 399 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 DNAJB5O75953 348 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 RPS17P08708 135 aaKnown RBP8.6□□□□□ -1.03
SMC1A-203ENST00000428014 ZNF888P0CJ79 500 aaPredicted RBP8.6□□□□□ -1.03
SMC1A-203ENST00000428014 HSD3B1P14060 373 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 GFAPP14136 432 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 CD22P20273 847 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 PTX3P26022 381 aaPredicted RBP8.6□□□□□ -1.03
SMC1A-203ENST00000428014 HSD3B2P26439 372 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 GCAP28676 217 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 PPP2R1BP30154 601 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 GALNSP34059 522 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 GSTM5P46439 218 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 PGGT1BP53609 377 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 RAB38P57729 211 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 SERTAD2Q14140 314 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 SLC29A2Q14542 456 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 RBBP5Q15291 538 aaKnown RBP8.6□□□□□ -1.03
SMC1A-203ENST00000428014 DEFB134Q4QY38 66 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 PRAMEF9Q5VWM5 478 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 SLC6A19Q695T7 634 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 CLEC18BQ6UXF7 455 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 ANKRD37Q7Z713 158 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 RBMXL3Q8N7X1 1067 aaKnown RBP8.6□□□□□ -1.03
SMC1A-203ENST00000428014 CLEC18CQ8NCF0 446 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 OR8K3Q8NH51 312 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 WDR20Q8TBZ3 569 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 RDH11Q8TC12 318 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 TRPC4APQ8TEL6 797 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 ALKBH8Q96BT7 664 aaKnown RBP8.6□□□□□ -1.03
SMC1A-203ENST00000428014 METTL2AQ96IZ6 378 aaKnown RBP8.6□□□□□ -1.03
SMC1A-203ENST00000428014 ROPN1BQ9BZX4 212 aaPredicted RBP8.6□□□□□ -1.03
SMC1A-203ENST00000428014 EPN3Q9H201 632 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 ROPN1Q9HAT0 212 aaPredicted RBP8.6□□□□□ -1.03
SMC1A-203ENST00000428014 BRF2Q9HAW0 419 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 PRDM7Q9NQW5 492 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 DAPP1Q9UN19 280 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms