RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TFEBP19484 476 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 CD22P20273 847 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 KCNK10P57789 538 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 TUBA3CQ13748 450 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 DOC2AQ14183 400 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 PDK4Q16654 411 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 XKR6Q5GH73 641 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 ZNF766Q5HY98 468 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 TUBA3EQ6PEY2 450 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 VN1R5Q7Z5H4 357 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 TTLQ8NG68 377 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 MS4A6EQ96DS6 147 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 MRRFQ96E11 262 aaKnown RBP17.26■□□□□ 0.35
PSPC1-202ENST00000427943 FAR2Q96K12 515 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 SIGLEC12Q96PQ1 595 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 LRRC1Q9BTT6 524 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 CAPS2Q9BXY5 557 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 HES7Q9BYE0 225 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 COPG2Q9UBF2 871 aa17.26■□□□□ 0.35
PSPC1-202ENST00000427943 PTBP2Q9UKA9 531 aaKnown RBP17.26■□□□□ 0.35
PSPC1-202ENST00000427943 NBPF19A0A087WUL8 3843 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 IGKV3D-11A0A0A0MRZ8 115 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 TCRBV16S1A1N1A0A5B0 115 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 WIPF3A6NGB9 483 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 ANKDD1BA6NHY2 528 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 SAGE2PA6NJ88 616 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 SUPT3HB4E1H0 165 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 LRRTM2O43300 516 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 SUPT3HO75486 399 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 KCNC1P48547 511 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 PLA2G16P53816 162 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 TAS2R50P59544 299 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 BMPR2Q13873 1038 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 RUNX2Q13950 521 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 C4orf17Q53FE4 359 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 CDKL4Q5MAI5 379 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 TBC1D1Q86TI0 1168 aaPredicted RBP17.25■□□□□ 0.35
PSPC1-202ENST00000427943 SLC5A8Q8N695 610 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 FAM47BQ8NA70 645 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 MDS2Q8NDY4 140 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 PTCD3Q96EY7 689 aaKnown RBP17.25■□□□□ 0.35
PSPC1-202ENST00000427943 UTP23Q9BRU9 249 aaKnown RBP17.25■□□□□ 0.35
PSPC1-202ENST00000427943 EHD1Q9H4M9 534 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 NT5DC2Q9H857 520 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 CLK4Q9HAZ1 481 aaKnown RBP17.25■□□□□ 0.35
PSPC1-202ENST00000427943 PRDM9Q9NQV7 894 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 KLHL1Q9NR64 748 aa17.25■□□□□ 0.35
PSPC1-202ENST00000427943 LRIT2A6NDA9 550 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 GABRR3A8MPY1 467 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 UBXN8O00124 270 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 CLEC3AO75596 197 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 URI1O94763 535 aaPredicted RBP17.24■□□□□ 0.35
PSPC1-202ENST00000427943 TBX6O95947 436 aaPredicted RBP17.24■□□□□ 0.35
PSPC1-202ENST00000427943 EPORP19235 508 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 MST1P26927 711 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 COL8A1P27658 744 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 GSTM2P28161 218 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 CD96P40200 585 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 HNRNPFP52597 415 aaKnown RBP17.24■□□□□ 0.35
PSPC1-202ENST00000427943 IRF9Q00978 393 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 OC90Q02509 493 aaPredicted RBP17.24■□□□□ 0.35
PSPC1-202ENST00000427943 NAB1Q13506 487 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 OR1C1Q15619 314 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 UBAP2Q5T6F2 1119 aaKnown RBP17.24■□□□□ 0.35
PSPC1-202ENST00000427943 C1QL3Q5VWW1 255 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 MAMDC2Q7Z304 686 aaPredicted RBP17.24■□□□□ 0.35
PSPC1-202ENST00000427943 ELP5Q8TE02 316 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 KCTD4Q8WVF5 259 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 QRFPRQ96P65 431 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 ATOH8Q96SQ7 321 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 REXO4Q9GZR2 422 aaKnown RBP17.24■□□□□ 0.35
PSPC1-202ENST00000427943 CDCP1Q9H5V8 836 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 IGSF5Q9NSI5 407 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 ZDHHC18Q9NUE0 388 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 NUDT4Q9NZJ9 180 aa17.24■□□□□ 0.35
PSPC1-202ENST00000427943 ZNF490Q9ULM2 529 aaPredicted RBP17.24■□□□□ 0.35
PSPC1-202ENST00000427943 MYO7BQ6PIF6 2116 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 CRYABP02511 175 aaKnown RBP17.23■□□□□ 0.35
PSPC1-202ENST00000427943 LTA4HP09960 611 aaKnown RBP17.23■□□□□ 0.35
PSPC1-202ENST00000427943 MYBL2P10244 700 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 CERS1P27544 350 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 RAB38P57729 211 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 IRF8Q02556 426 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 GUCY2DQ02846 1103 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 CHIT1Q13231 466 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 UAP1Q16222 522 aaPredicted RBP17.23■□□□□ 0.35
PSPC1-202ENST00000427943 SPINK14Q6IE38 97 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 TRIM40Q6P9F5 258 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 GFRALQ6UXV0 394 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 LRRC70Q7Z2Q7 622 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 ISCA2Q86U28 154 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 TMEM52Q8NDY8 209 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 ARMC2Q8NEN0 867 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 OR2L5Q8NG80 312 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 STAG3L4Q8TBR4 150 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 NXNL1Q96CM4 212 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 WDR34Q96EX3 536 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 CSF3RQ99062 836 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 EFCAB11Q9BUY7 163 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 CD244Q9BZW8 370 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms