RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 CDH17Q12864 832 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 SPARCL1Q14515 664 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 FASTKD3Q14CZ7 662 aaKnown RBP5.33□□□□□ -1.56
C9orf3-205ENST00000427193 E2F5Q15329 346 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 ZNF628Q5EBL2 1059 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 SIRPB2Q5JXA9 342 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 NAPEPLDQ6IQ20 393 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 ZNF449Q6P9G9 518 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 BRAT1Q6PJG6 821 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 LINC00523Q86TU6 105 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 CAMK1DQ8IU85 385 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 BBS5Q8N3I7 341 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 TTC30BQ8N4P2 665 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 SRFBP1Q8NEF9 429 aaKnown RBP5.33□□□□□ -1.56
C9orf3-205ENST00000427193 ADAMTS14Q8WXS8 1223 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 INPP5DQ92835 1189 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 SCRN2Q96FV2 425 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 FMO2Q99518 471 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 EBNA1BP2Q99848 306 aaKnown RBP5.33□□□□□ -1.56
C9orf3-205ENST00000427193 TBL1YQ9BQ87 522 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 TM6SF2Q9BZW4 377 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 TRIM31Q9BZY9 425 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 IL22Q9GZX6 179 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 TSPYL1Q9H0U9 437 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 PRORYQ9H606 182 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 MAGEE1Q9HCI5 957 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 SPAG4Q9NPE6 437 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 SIRT3Q9NTG7 399 aaPredicted RBP5.33□□□□□ -1.56
C9orf3-205ENST00000427193 EURLQ9NYK6 297 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 SEPT10Q9P0V9 454 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 NFKBIL1Q9UBC1 381 aaPredicted RBP5.33□□□□□ -1.56
C9orf3-205ENST00000427193 SUN2Q9UH99 717 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 SLC25A13Q9UJS0 675 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 ANAPC5Q9UJX4 755 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 MMP17Q9ULZ9 603 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 PLA2G4CQ9UP65 541 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 UBE2J1Q9Y385 318 aaPredicted RBP5.33□□□□□ -1.56
C9orf3-205ENST00000427193 NFS1Q9Y697 457 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 FAM237BA0A1B0GVD1 139 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 A0A1W2PQ67 120 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 MAGEB16A2A368 324 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 POM121BA6NF01 834 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 SDR42E2A6NKP2 422 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 H7C0S8 307 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 AP3B1O00203 1094 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 GAPDHSO14556 408 aaPredicted RBP5.32□□□□□ -1.56
C9orf3-205ENST00000427193 MAP2K7O14733 419 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 TCEA3O75764 348 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 FAM155BO75949 473 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 PIGNO95427 931 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 TTC4O95801 387 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 ABHD2P08910 425 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 NUDT17P0C025 328 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 EGR1P18146 543 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 LHCGRP22888 699 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 MCM3P25205 808 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 ACTN2P35609 894 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 HMGCLP35914 325 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 PIK3CBP42338 1070 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 DPP6P42658 865 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 CSRP3P50461 194 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 SUOXP51687 545 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 ZNF140P52738 457 aaPredicted RBP5.32□□□□□ -1.56
C9orf3-205ENST00000427193 METAP1P53582 386 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 TAS2R38P59533 333 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 RPS14P62263 151 aaKnown RBP5.32□□□□□ -1.56
C9orf3-205ENST00000427193 BASP1P80723 227 aaKnown RBP5.32□□□□□ -1.56
C9orf3-205ENST00000427193 ZBTB16Q05516 673 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 RALGDSQ12967 914 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 CALCOCO2Q13137 446 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 PRPSAP1Q14558 356 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 NFATC4Q14934 902 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 RASA2Q15283 850 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 UGP2Q16851 508 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 CCDC38Q502W7 563 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 ZNF805Q5CZA5 627 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 PIP5KL1Q5T9C9 394 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 CCDC70Q6NSX1 233 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 FBXO38Q6PIJ6 1188 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 C16orf89Q6UX73 402 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 GDPD4Q6W3E5 623 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 PPP1R21Q6ZMI0 780 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 TRMT10CQ7L0Y3 403 aaKnown RBP5.32□□□□□ -1.56
C9orf3-205ENST00000427193 SYT13Q7L8C5 426 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 CNTN4Q8IWV2 1026 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 PDIK1LQ8N165 341 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 STK40Q8N2I9 435 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 PAQR4Q8N4S7 273 aaPredicted RBP5.32□□□□□ -1.56
C9orf3-205ENST00000427193 AADATQ8N5Z0 425 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 RNF152Q8N8N0 203 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 IPMKQ8NFU5 416 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 OR52K1Q8NGK4 314 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 OR13J1Q8NGT2 312 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 OR6K2Q8NGY2 324 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 OR2T3Q8NH03 318 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 BRSK1Q8TDC3 778 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 UCMAQ8WVF2 138 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 ARRDC3Q96B67 414 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 WBP1Q96G27 269 aa5.32□□□□□ -1.56
C9orf3-205ENST00000427193 SMIM14Q96QK8 99 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms