RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 CHST8Q9H2A9 424 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 KLHL31Q9H511 634 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 ACTR8Q9H981 624 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 KCNK9Q9NPC2 374 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 IRAK4Q9NWZ3 460 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 MID2Q9UJV3 735 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 SRPK3Q9UPE1 567 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 TSC22D4Q9Y3Q8 395 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 CCDC88CQ9P219 2028 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 A0A0A6YYC8 382 aaPredicted RBP7.03□□□□□ -1.28
LINC01049-201ENST00000426840 A0A1B0GX78 115 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 LRIT2A6NDA9 550 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 ANKDD1BA6NHY2 528 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 C4orf51C9J302 202 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 F8W735 103 aaPredicted RBP7.03□□□□□ -1.28
LINC01049-201ENST00000426840 H0YIV9 168 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 I3L1I5 382 aaPredicted RBP7.03□□□□□ -1.28
LINC01049-201ENST00000426840 TM9SF1O15321 606 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 KLK10O43240 276 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 ADAM11O75078 769 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 CNOT3O75175 753 aaKnown RBP7.03□□□□□ -1.28
LINC01049-201ENST00000426840 DNAJB6O75190 326 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 CLEC3AO75596 197 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 OR4F21O95013 312 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 SERPIND1P05546 499 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 WT1P19544 449 aaPredicted RBP7.03□□□□□ -1.28
LINC01049-201ENST00000426840 TCN2P20062 427 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 ITPKBP27987 946 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 GSTM2P28161 218 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 STAT5AP42229 794 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 CCR10P46092 362 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 OR1D4P47884 311 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 NEK2P51955 445 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 CCNG1P51959 295 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 SLC18A1P54219 525 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 MAGOHP61326 146 aaKnown RBP7.03□□□□□ -1.28
LINC01049-201ENST00000426840 CYP4F2P78329 520 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 DCDP81605 110 aaKnown RBP7.03□□□□□ -1.28
LINC01049-201ENST00000426840 ZRSR2Q15696 482 aaKnown RBP7.03□□□□□ -1.28
LINC01049-201ENST00000426840 CPSF6Q16630 551 aaKnown RBP eCLIP7.03□□□□□ -1.28
LINC01049-201ENST00000426840 NDUFA9Q16795 377 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 SPRED3Q2MJR0 410 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 MUM1Q2TAK8 710 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 ADPRMQ3LIE5 342 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 GGTA1PQ4G0N0 100 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 NKAIN1Q4KMZ8 207 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 TTMPQ5BVD1 217 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 LIPMQ5VYY2 423 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 CES4AQ5XG92 561 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 LETMD1Q6P1Q0 360 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 PRMT9Q6P2P2 845 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 COX15Q7KZN9 410 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 OVCH1Q7RTY7 1134 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 PRSS41Q7RTY9 318 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 UBE3DQ7Z6J8 389 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 SYVN1Q86TM6 617 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 TMEM151BQ8IW70 566 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 SPACA3Q8IXA5 215 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.03□□□□□ -1.28
LINC01049-201ENST00000426840 SHISA5Q8N114 240 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 RNF175Q8N4F7 328 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 CCNYL1Q8N7R7 359 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 TTLQ8NG68 377 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 PROKR1Q8TCW9 393 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 UTP15Q8TED0 518 aaKnown RBP7.03□□□□□ -1.28
LINC01049-201ENST00000426840 PPP4R1Q8TF05 950 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 CT55Q8WUE5 264 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 KCNE4Q8WWG9 221 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 MR1Q95460 341 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 UBE2E3Q969T4 207 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 MVB12AQ96EY5 273 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 SEC16BQ96JE7 1060 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 ATP6V1G3Q96LB4 118 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 DMRTB1Q96MA1 342 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 F2RL3Q96RI0 385 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 RUFY1Q96T51 708 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 DPH2Q9BQC3 489 aaPredicted RBP7.03□□□□□ -1.28
LINC01049-201ENST00000426840 NLNQ9BYT8 704 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 BHLHE41Q9C0J9 482 aaPredicted RBP7.03□□□□□ -1.28
LINC01049-201ENST00000426840 STMN4Q9H169 189 aaPredicted RBP7.03□□□□□ -1.28
LINC01049-201ENST00000426840 ZNF304Q9HCX3 659 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 TXLNGQ9NUQ3 528 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 PSD3Q9NYI0 1048 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 NDOR1Q9UHB4 597 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 IL17BQ9UHF5 180 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 TRPS1Q9UHF7 1281 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 CROTQ9UKG9 612 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 CDC14AQ9UNH5 594 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 FARSAQ9Y285 508 aaKnown RBP7.03□□□□□ -1.28
LINC01049-201ENST00000426840 SLC22A7Q9Y694 548 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 CEP295Q9C0D2 2601 aa7.03□□□□□ -1.28
LINC01049-201ENST00000426840 ACACBO00763 2458 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 TMEM120BA0PK00 339 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 GOLGA6L10A6NI86 522 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 SRRM3A6NNA2 597 aaPredicted RBP7.02□□□□□ -1.29
LINC01049-201ENST00000426840 H0YIG0 161 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 FOXE1O00358 373 aaPredicted RBP7.02□□□□□ -1.29
LINC01049-201ENST00000426840 BIRC5O15392 142 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 RRP8O43159 456 aaKnown RBP7.02□□□□□ -1.29
LINC01049-201ENST00000426840 NDUFS4O43181 175 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms