RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ZNF717Q9BY31 904 aaPredicted RBP16.11■□□□□ 0.17
COL7A1-202ENST00000422991 SLC22A11Q9NSA0 550 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 PTGDR2Q9Y5Y4 395 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 MAU2Q9Y6X3 613 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 NUP210LQ5VU65 1888 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 CFAP47Q6ZTR5 3102 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 A0A088AWK7 358 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 ZNF860A6NHJ4 632 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 H0YIG0 161 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 SGK494L7N484 410 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 TAF4O00268 1085 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 RTCAO00442 366 aaKnown RBP16.1■□□□□ 0.17
COL7A1-202ENST00000422991 PIP5K1BO14986 540 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 TLX3O43711 291 aaPredicted RBP16.1■□□□□ 0.17
COL7A1-202ENST00000422991 RDH16O75452 317 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 SCELO95171 688 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 ZNF10P21506 573 aaPredicted RBP16.1■□□□□ 0.17
COL7A1-202ENST00000422991 AGXTP21549 392 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 FBLP22087 321 aaKnown RBP16.1■□□□□ 0.17
COL7A1-202ENST00000422991 TSFMP43897 325 aaKnown RBP16.1■□□□□ 0.17
COL7A1-202ENST00000422991 BTN3A2P78410 334 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 HMGCS1Q01581 520 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 GUCY1A3Q02108 690 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 ARHGAP40Q5TG30 622 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 ZNF793Q6ZN11 406 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 CACNA2D3Q8IZS8 1091 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 FGF11Q92914 225 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 NKD1Q969G9 470 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 FAR2Q96K12 515 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 SORBS1Q9BX66 1292 aaKnown RBP16.1■□□□□ 0.17
COL7A1-202ENST00000422991 MRPL1Q9BYD6 325 aaKnown RBP16.1■□□□□ 0.17
COL7A1-202ENST00000422991 CHST8Q9H2A9 424 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 ZNF304Q9HCX3 659 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 SLCO1B3Q9NPD5 702 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 PRDM7Q9NQW5 492 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 PNPOQ9NVS9 261 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 NMRK1Q9NWW6 199 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 VPS29Q9UBQ0 182 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 PADI1Q9ULC6 663 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 CCL27Q9Y4X3 112 aa16.1■□□□□ 0.17
COL7A1-202ENST00000422991 SKAP2O75563 359 aaPredicted RBP16.09■□□□□ 0.17
COL7A1-202ENST00000422991 JUNP05412 331 aaKnown RBP16.09■□□□□ 0.17
COL7A1-202ENST00000422991 CCNYL3P0C7X3 344 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 ATP5A1P25705 553 aaKnown RBP16.09■□□□□ 0.17
COL7A1-202ENST00000422991 CERS1P27544 350 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 BSGP35613 385 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 SSR2P43308 183 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 MTTPP55157 894 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 TBL3Q12788 808 aaKnown RBP16.09■□□□□ 0.17
COL7A1-202ENST00000422991 SLC9A5Q14940 896 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 AP5B1Q2VPB7 878 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 XKR7Q5GH72 579 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 OR4C11Q6IEV9 310 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 FAM199XQ6PEV8 388 aaPredicted RBP16.09■□□□□ 0.17
COL7A1-202ENST00000422991 DDIASQ8IXT1 998 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 METTL4Q8N3J2 472 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 CT55Q8WUE5 264 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 COL26A1Q96A83 441 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 FKBP10Q96AY3 582 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 SERINC2Q96SA4 455 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 ROGDIQ9GZN7 287 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 COPS7BQ9H9Q2 264 aaPredicted RBP16.09■□□□□ 0.17
COL7A1-202ENST00000422991 CLK4Q9HAZ1 481 aaKnown RBP16.09■□□□□ 0.17
COL7A1-202ENST00000422991 FAM53CQ9NYF3 392 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 HCN3Q9P1Z3 774 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 MARCOQ9UEW3 520 aaPredicted RBP16.09■□□□□ 0.17
COL7A1-202ENST00000422991 MAP4K5Q9Y4K4 846 aa16.09■□□□□ 0.17
COL7A1-202ENST00000422991 DSPP15924 2871 aaKnown RBP16.09■□□□□ 0.17
COL7A1-202ENST00000422991 ACACAQ13085 2346 aa16.08■□□□□ 0.17
COL7A1-202ENST00000422991 C9J4A7 227 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 NPIPB8E9PQR5 432 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 SLC28A1O00337 649 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 TERTO14746 1132 aaKnown RBP16.08■□□□□ 0.16
COL7A1-202ENST00000422991 B3GALT2O43825 422 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 EEDO75530 441 aaKnown RBP16.08■□□□□ 0.16
COL7A1-202ENST00000422991 RSL1D1O76021 490 aaKnown RBP16.08■□□□□ 0.16
COL7A1-202ENST00000422991 LINC00032P0C843 101 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 PIM1P11309 404 aaPredicted RBP16.08■□□□□ 0.16
COL7A1-202ENST00000422991 HIST1H1TP22492 207 aaPredicted RBP16.08■□□□□ 0.16
COL7A1-202ENST00000422991 PRPH2P23942 346 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 MDH1P40925 334 aaKnown RBP16.08■□□□□ 0.16
COL7A1-202ENST00000422991 MAT1AQ00266 395 aaKnown RBP16.08■□□□□ 0.16
COL7A1-202ENST00000422991 BTKQ06187 659 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 TGIF1Q15583 401 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 PDCD2Q16342 344 aaPredicted RBP16.08■□□□□ 0.16
COL7A1-202ENST00000422991 IMPG1Q17R60 797 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 COMMD6Q7Z4G1 85 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 NUDT13Q86X67 352 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 CRLF3Q8IUI8 442 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 ZCCHC7Q8N3Z6 543 aaKnown RBP16.08■□□□□ 0.16
COL7A1-202ENST00000422991 ACOT4Q8N9L9 421 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 OR5T3Q8NGG3 340 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 OR2T11Q8NH01 316 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 C19orf60Q96EN9 201 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 CCT7Q99832 543 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 CCDC134Q9H6E4 229 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 DDX31Q9H8H2 851 aaKnown RBP16.08■□□□□ 0.16
COL7A1-202ENST00000422991 AHSPQ9NZD4 102 aa16.08■□□□□ 0.16
COL7A1-202ENST00000422991 IFT80Q9P2H3 777 aaPredicted RBP16.08■□□□□ 0.16
COL7A1-202ENST00000422991 CTSFQ9UBX1 484 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms