RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 CSNK1EP49674 416 aaKnown RBP19.97■□□□□ 0.79
GPC1-202ENST00000420138 MAPK12P53778 367 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 PLA2G16P53816 162 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 ELOCQ15369 112 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.97■□□□□ 0.79
GPC1-202ENST00000420138 ANXA8L1Q5VT79 327 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 R3HCC1LQ7Z5L2 792 aaKnown RBP19.97■□□□□ 0.79
GPC1-202ENST00000420138 TMEM105Q8N8V8 129 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 FAM110BQ8TC76 370 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 LMX1AQ8TE12 382 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 BTBD9Q96Q07 612 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 PCDHGA2Q9Y5H1 932 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 ENTPD2Q9Y5L3 495 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 A0A0G2JN53 185 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 C1orf226A1L170 272 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 VILLO15195 856 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 CTSVO60911 334 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 SMNDC1O75940 238 aaKnown RBP eCLIP19.96■□□□□ 0.79
GPC1-202ENST00000420138 CPSF4O95639 269 aaKnown RBP19.96■□□□□ 0.79
GPC1-202ENST00000420138 CAPNS1P04632 268 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 SLC7A1P30825 629 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 RPL3P39023 403 aaKnown RBP19.96■□□□□ 0.79
GPC1-202ENST00000420138 MAZP56270 477 aaKnown RBP19.96■□□□□ 0.79
GPC1-202ENST00000420138 CSTF1Q05048 431 aaKnown RBP19.96■□□□□ 0.79
GPC1-202ENST00000420138 ABHD17CQ6PCB6 329 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 WDR5BQ86VZ2 330 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 RBM12BQ8IXT5 1001 aaKnown RBP19.96■□□□□ 0.79
GPC1-202ENST00000420138 GOLM1Q8NBJ4 401 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 OR2T12Q8NG77 320 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 CANT1Q8WVQ1 401 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 PPCDCQ96CD2 204 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 QRFPRQ96P65 431 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 C17orf62Q9BQA9 187 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 CENPKQ9BS16 269 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 SLC6A16Q9GZN6 736 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 PRDM7Q9NQW5 492 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 HRASLS2Q9NWW9 162 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 PILRAQ9UKJ1 303 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 WBP11Q9Y2W2 641 aaKnown RBP19.96■□□□□ 0.79
GPC1-202ENST00000420138 BDP1A6H8Y1 2624 aa19.96■□□□□ 0.79
GPC1-202ENST00000420138 ZW10O43264 779 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 ZCCHC18P0CG32 403 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 GGT1P19440 569 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 SNRPNP63162 240 aaKnown RBP19.95■□□□□ 0.78
GPC1-202ENST00000420138 SLC5A12Q1EHB4 618 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 WDR45BQ5MNZ6 344 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 IRAK1BP1Q5VVH5 260 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 TMEM154Q6P9G4 183 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 SPESP1Q6UW49 350 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 C17orf82Q86X59 251 aaPredicted RBP19.95■□□□□ 0.78
GPC1-202ENST00000420138 TICAM1Q8IUC6 712 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 TBC1D19Q8N5T2 526 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 TMEM102Q8N9M5 508 aaPredicted RBP19.95■□□□□ 0.78
GPC1-202ENST00000420138 GOT1L1Q8NHS2 421 aaPredicted RBP19.95■□□□□ 0.78
GPC1-202ENST00000420138 CIDECQ96AQ7 238 aaPredicted RBP19.95■□□□□ 0.78
GPC1-202ENST00000420138 OR2A5Q96R48 311 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 TRIM15Q9C019 465 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 ABCG4Q9H172 646 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 VCXQ9H320 206 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 SPASTQ9UBP0 616 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 TNRC6BQ9UPQ9 1833 aaKnown RBP19.95■□□□□ 0.78
GPC1-202ENST00000420138 AP3M1Q9Y2T2 418 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 GMEB1Q9Y692 573 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 ARHGAP10A1A4S6 786 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 A6NHS1 94 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 C2orf74A8MZ97 194 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 NOBOXO60393 691 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 TBX19O60806 448 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 DDCP20711 480 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 PPP1CAP62136 330 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 RPS15AP62244 130 aaKnown RBP19.95■□□□□ 0.78
GPC1-202ENST00000420138 GAB1Q13480 694 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 GLYATQ6IB77 296 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 FIGLAQ6QHK4 219 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 ZNF621Q6ZSS3 439 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 ZNF438Q7Z4V0 828 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 PROSER1Q86XN7 944 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 ADGRG5Q8IZF4 528 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 MAML2Q8IZL2 1156 aaPredicted RBP19.95■□□□□ 0.78
GPC1-202ENST00000420138 VPS37AQ8NEZ2 397 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 EFHD1Q9BUP0 239 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 TRIM4Q9C037 500 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 CCM2LQ9NUG4 571 aaPredicted RBP19.95■□□□□ 0.78
GPC1-202ENST00000420138 ATAD3AQ9NVI7 634 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 TEX10Q9NXF1 929 aaPredicted RBP19.95■□□□□ 0.78
GPC1-202ENST00000420138 SCOCQ9UIL1 159 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 MAGEL2Q9UJ55 1249 aa19.95■□□□□ 0.78
GPC1-202ENST00000420138 SPAG17Q6Q759 2223 aa19.94■□□□□ 0.78
GPC1-202ENST00000420138 OR5K3A6NET4 321 aa19.94■□□□□ 0.78
GPC1-202ENST00000420138 CLIC1O00299 241 aa19.94■□□□□ 0.78
GPC1-202ENST00000420138 PRAMEF10O60809 474 aa19.94■□□□□ 0.78
GPC1-202ENST00000420138 GPR37L1O60883 481 aa19.94■□□□□ 0.78
GPC1-202ENST00000420138 FASLGP48023 281 aa19.94■□□□□ 0.78
GPC1-202ENST00000420138 ARFIP1P53367 373 aa19.94■□□□□ 0.78
GPC1-202ENST00000420138 HBA1P69905 142 aa19.94■□□□□ 0.78
GPC1-202ENST00000420138 MED21Q13503 144 aa19.94■□□□□ 0.78
GPC1-202ENST00000420138 TOR1AIP1Q5JTV8 583 aa19.94■□□□□ 0.78
GPC1-202ENST00000420138 GKN2Q86XP6 184 aa19.94■□□□□ 0.78
GPC1-202ENST00000420138 ARL14Q8N4G2 192 aa19.94■□□□□ 0.78
GPC1-202ENST00000420138 FAM47BQ8NA70 645 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms