RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 MLYCDO95822 493 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 CD1DP15813 335 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 ZNF10P21506 573 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 EEF1DP29692 281 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 CASQ1P31415 396 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 HPDP32754 393 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 SPRP35270 261 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 CAV1Q03135 178 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 C2orf54Q08AI8 447 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 GRTP1Q5TC63 336 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 SPINK14Q6IE38 97 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 SLC34A3Q8N130 599 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 SPATA6LQ8N4H0 392 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 FAM98AQ8NCA5 519 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 MS4A6EQ96DS6 147 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 TMEM79Q9BSE2 394 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 NECTIN3Q9NQS3 549 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 KLHL1Q9NR64 748 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 ANKRD10Q9NXR5 420 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 TRGV8A0A0C4DH27 118 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 LRIT2A6NDA9 550 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 ERI3O43414 337 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 SP1P08047 785 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 MAOAP21397 527 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 PLTPP55058 493 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 GPX6P59796 221 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 RAB10P61026 200 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 PMP22Q01453 160 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 RUNX2Q13950 521 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 ZKSCAN8Q15776 578 aaPredicted RBP16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 KRTCAP3Q53RY4 240 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 SLC25A25Q6KCM7 469 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 CTAGE3PQ8IX95 158 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 KIF2BQ8N4N8 673 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 NFAM1Q8NET5 270 aaPredicted RBP16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 ADAMTS18Q8TE60 1221 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 KIAA1191Q96A73 305 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 RAB17Q9H0T7 212 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 CD274Q9NZQ7 290 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 LRFN1Q9P244 771 aa16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 SUCOQ9UBS9 1254 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-208ENST00000416159 NBPF19A0A087WUL8 3843 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 UNC79Q9P2D8 2635 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 ASPDHA6ND91 283 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 A8MUA0 341 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 CLDN4O14493 209 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 B3GALT2O43825 422 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 S100BP04271 92 aaPredicted RBP16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 HNRNPH1P31943 449 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 HSPA7P48741 367 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 RAB38P57729 211 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 MLF1P58340 268 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 ALDH6A1Q02252 535 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 SRSF11Q05519 484 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 LAPTM5Q13571 262 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 PDK4Q16654 411 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 ADPRMQ3LIE5 342 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 XKR6Q5GH73 641 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 SNX31Q8N9S9 440 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 PDPRQ8NCN5 879 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 OR2L5Q8NG80 312 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 ESAMQ96AP7 390 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 WDR34Q96EX3 536 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 PTCD3Q96EY7 689 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 UBXN10Q96LJ8 280 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 QRFPRQ96P65 431 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 EFCAB11Q9BUY7 163 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 HES7Q9BYE0 225 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 DEFB126Q9BYW3 111 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 REXO4Q9GZR2 422 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 PRTFDC1Q9NRG1 225 aa16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 PTBP2Q9UKA9 531 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-208ENST00000416159 A0A0G2JN53 185 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 SYNDIG1LA6NDD5 238 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 CCL21O00585 134 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 FCHO1O14526 889 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 NEURL1O76050 574 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 C1QAP02745 245 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 TPP2P29144 1249 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 CA7P43166 264 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 MAGEA4P43358 317 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 CYB561P49447 251 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 ST13P50502 369 aaKnown RBP16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 CASP6P55212 293 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 HSD17B7P56937 341 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 ETF1P62495 437 aaKnown RBP16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 TGM3Q08188 693 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 DOC2AQ14183 400 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 TERF2Q15554 542 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 OR4D1Q15615 310 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 HIST2H2ACQ16777 129 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 KBTBD12Q3ZCT8 623 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 PAGE2BQ5JRK9 111 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 HIST2H2AA3Q6FI13 130 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 MTFR2Q6P444 385 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 TRIM40Q6P9F5 258 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 GALNTL5Q7Z4T8 443 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 SCUBE1Q8IWY4 988 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 PPM1NQ8N819 430 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 B3GNT7Q8NFL0 401 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms