RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 MAU2Q9Y6X3 613 aa12.45□□□□□ -0.42
CNOT4-204ENST00000414802 TEX51A0A1B0GUA7 166 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 URADA6NGE7 173 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 E9PBE3 544 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 DSCR3O14972 297 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 PCDH7O60245 1069 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 KLHL41O60662 606 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 DNAJB6O75190 326 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 TNFSF15O95150 251 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 KLK1P06870 262 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 PRPH2P23942 346 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 ATP5A1P25705 553 aaKnown RBP12.44□□□□□ -0.42
CNOT4-204ENST00000414802 ID4P47928 161 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 SPIN4Q56A73 249 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 C6orf136Q5SQH8 315 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 DCAF12Q5T6F0 453 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 GARNL3Q5VVW2 1013 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 OR4C11Q6IEV9 310 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 SPATA21Q7Z572 469 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 NUDT13Q86X67 352 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 FNDC5Q8NAU1 212 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 CDC26Q8NHZ8 85 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 CHTF18Q8WVB6 975 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 C10orf82Q8WW14 230 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 CLIP3Q96DZ5 547 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 MMABQ96EY8 250 aaPredicted RBP12.44□□□□□ -0.42
CNOT4-204ENST00000414802 PPP3R2Q96LZ3 170 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 KCNC2Q96PR1 638 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 TAAR9Q96RI9 348 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 ULBP3Q9BZM4 244 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 TCF7L2Q9NQB0 619 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 PFDN4Q9NQP4 134 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 PRDM7Q9NQW5 492 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 NMRK1Q9NWW6 199 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 PSD3Q9NYI0 1048 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 HCN3Q9P1Z3 774 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 KLHL14Q9P2G3 628 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 DLGAP4Q9Y2H0 992 aa12.44□□□□□ -0.42
CNOT4-204ENST00000414802 NCOR2Q9Y618 2525 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 A0A1B0GX78 115 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 GALR3O60755 368 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-204ENST00000414802 CPNE3O75131 537 aaKnown RBP12.43□□□□□ -0.42
CNOT4-204ENST00000414802 ALDOCP09972 364 aaKnown RBP12.43□□□□□ -0.42
CNOT4-204ENST00000414802 PRR35P0CG20 571 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 ITGAXP20702 1163 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 HIST1H1TP22492 207 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-204ENST00000414802 TPP2P29144 1249 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-204ENST00000414802 TIA1P31483 386 aaKnown RBP eCLIP12.43□□□□□ -0.423e-7■■■■□ 24.4
CNOT4-204ENST00000414802 OR1D4P47884 311 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 ARFIP2P53365 341 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 MAT1AQ00266 395 aaKnown RBP12.43□□□□□ -0.42
CNOT4-204ENST00000414802 TGM3Q08188 693 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 HERC3Q15034 1050 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 SYT16Q17RD7 645 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 FAM214AQ32MH5 1076 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 LSM12Q3MHD2 195 aaKnown RBP12.43□□□□□ -0.42
CNOT4-204ENST00000414802 RFTN2Q52LD8 501 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-204ENST00000414802 MANEAQ5SRI9 462 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 ACAD11Q709F0 780 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 LARP4Q71RC2 724 aaKnown RBP eCLIP12.43□□□□□ -0.427e-7■■■■■ 35.5
CNOT4-204ENST00000414802 CLHC1Q8NHS4 586 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 CCT7Q99832 543 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 TBCDQ9BTW9 1192 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 DDA1Q9BW61 102 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 RBCK1Q9BYM8 510 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 POLR1BQ9H9Y6 1135 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 ENAMQ9NRM1 1142 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 SRPK3Q9UPE1 567 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 PCDHB3Q9Y5E6 796 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 SLC22A7Q9Y694 548 aa12.43□□□□□ -0.42
CNOT4-204ENST00000414802 ARHGAP10A1A4S6 786 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 NPIPB8E9PQR5 432 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 TMPRSS11DO60235 418 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 VPS4BO75351 444 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 LBPP18428 481 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 ARSFP54793 590 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 CBX1P83916 185 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 KIAA0040Q15053 153 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 TUBB8Q3ZCM7 444 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 RHBDD2Q6NTF9 364 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 NOXRED1Q6NXP6 359 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 BPHLQ86WA6 291 aaPredicted RBP12.42□□□□□ -0.42
CNOT4-204ENST00000414802 ACOT4Q8N9L9 421 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 GALNT6Q8NCL4 622 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 SRFBP1Q8NEF9 429 aaKnown RBP12.42□□□□□ -0.42
CNOT4-204ENST00000414802 ACTRT2Q8TDY3 377 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 RILPQ96NA2 401 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 CATSPER2Q96P56 530 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 CCT8L2Q96SF2 557 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 AHSPQ9NZD4 102 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 FBXW2Q9UKT8 454 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 APC2O95996 2303 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 ACACAQ13085 2346 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 A0A0A6YYD5 115 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 GNG14A0A1W2PPG7 69 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 B3GALT2O43825 422 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 SNX3O60493 162 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 PRKRAO75569 313 aaKnown RBP12.42□□□□□ -0.42
CNOT4-204ENST00000414802 STK17BO94768 372 aa12.42□□□□□ -0.42
CNOT4-204ENST00000414802 NSA2O95478 260 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms